Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RBFOX3A6NFN3 AC100871.1-201ENST00000507871 1456 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC008725.1-201ENST00000605123 2263 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 LINC00561-201ENST00000565815 2738 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 RNU1-87P-201ENST00000363727 170 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 RN7SKP103-201ENST00000363848 320 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 RNU6-819P-201ENST00000364116 107 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 RNU1-106P-201ENST00000384382 164 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 HMGN2P8-201ENST00000391458 268 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 HMGB1P32-201ENST00000425971 565 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 FTH1P6-201ENST00000430768 320 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 RPS24P8-201ENST00000431490 402 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 CBX1P4-201ENST00000439415 457 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 RPL7P48-201ENST00000461513 746 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC010307.1-201ENST00000467206 836 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC018635.1-201ENST00000468292 1030 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC021087.2-201ENST00000504656 1203 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 HPRT1P2-201ENST00000505250 544 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 PCNAP1-201ENST00000505363 709 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC007016.1-201ENST00000512110 244 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 RNU6-491P-201ENST00000516099 110 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AP000676.2-201ENST00000529711 301 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 CBX3P5-201ENST00000552017 521 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 EDDM3DP-201ENST00000554692 434 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC105129.1-201ENST00000560250 297 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC106785.3-201ENST00000564064 847 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC009101.1-201ENST00000568135 242 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 ADAM3B-201ENST00000569937 840 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 NF1P5-201ENST00000588287 448 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC067852.4-201ENST00000590314 478 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AL445222.1-201ENST00000607259 628 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC020763.5-201ENST00000623298 430 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC091905.4-201ENST00000623432 202 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 LINC01808-202ENST00000641680 1116 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 LINC01739-205ENST00000641890 573 ntBASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
RBFOX3A6NFN3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 RNU1-18P-201ENST00000363062 164 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 SNORA71.2-201ENST00000364941 134 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 RNU6-185P-201ENST00000384421 107 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 RBMY2QP-201ENST00000429799 1147 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 RPL12P3-201ENST00000440080 396 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AC073648.4-201ENST00000442655 781 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 EXTL2P1-201ENST00000446218 416 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 RPL23AP43-201ENST00000446445 471 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 FABP3P2-201ENST00000453169 399 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 MTCO3P20-201ENST00000454926 688 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 RPL7P22-201ENST00000466005 733 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AC092045.1-201ENST00000495716 1231 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AC104164.2-201ENST00000496953 495 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 NDUFA5P12-201ENST00000503796 343 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 SCARNA22-201ENST00000503991 125 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 NDUFB5P1-201ENST00000508134 564 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 SNORA70.17-201ENST00000516449 133 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.34□□□□□ -1.87
RBFOX3A6NFN3 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms