Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC034105.3-201ENST00000565294 442 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 MIR5010-201ENST00000582846 120 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 MAGOH2P-202ENST00000584384 429 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 SNORD39.3-201ENST00000584451 71 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AL360012.1-201ENST00000602813 131 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AL031658.2-201ENST00000616850 651 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AL121985.3-201ENST00000620690 523 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC002550.2-201ENST00000621246 394 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC009161.2-201ENST00000624626 138 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.49□□□□□ -1.53
SHISA3A0PJX4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SHISA3A0PJX4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC078880.4-201ENST00000617627 1749 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 MFSD8-219ENST00000641228 2559 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 RN7SKP130-201ENST00000364924 301 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC245036.1-201ENST00000391727 309 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 BTBD10P2-201ENST00000404779 676 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 GAPDHP42-201ENST00000406848 981 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 RN7SKP32-201ENST00000410167 303 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AL139135.1-201ENST00000412675 209 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC083855.1-201ENST00000440041 258 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 MTCYBP6-201ENST00000441810 138 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 RNA5SP400-201ENST00000517155 111 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC105029.1-201ENST00000520250 669 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 CARSP2-201ENST00000520688 277 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC024405.1-201ENST00000532521 1042 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 RN7SL475P-201ENST00000583379 298 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC115085.1-201ENST00000588924 229 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 MIR132-201ENST00000591554 101 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 COX6CP4-201ENST00000605798 228 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 MRPL57P3-201ENST00000619218 176 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms