Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ERCC6-202ENST00000374127 1782 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 RN7SKP149-201ENST00000363008 344 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 RNU6-1005P-201ENST00000384519 107 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 MIR153-1-201ENST00000384914 90 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 RNA5SP239-201ENST00000410218 129 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 BX510359.2-201ENST00000417920 305 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC016831.4-201ENST00000438302 307 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL500527.1-201ENST00000448532 255 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 SNORD108-201ENST00000459332 71 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC074386.1-201ENST00000476560 767 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 RPL21P103-201ENST00000479921 488 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC025445.1-201ENST00000502728 300 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC008565.1-201ENST00000509046 885 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 RPL7L1P13-201ENST00000511702 739 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC015795.1-201ENST00000513669 327 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 RNA5SP497-201ENST00000516081 97 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 RN7SKP276-201ENST00000516242 268 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC069240.1-201ENST00000548774 375 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC090312.2-201ENST00000582687 378 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 OR7E18P-201ENST00000592589 702 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC005255.1-201ENST00000593748 216 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC008638.3-201ENST00000603341 463 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC005191.1-201ENST00000603950 358 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC024595.1-201ENST00000623088 387 ntBASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF103-CHMP3A0A140T963 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 PNPT1P2-201ENST00000456768 2050 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 ZNF33CP-201ENST00000432492 2030 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC011266.1-201ENST00000624119 3569 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 RNU6-543P-201ENST00000362576 108 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 SNORA71.2-201ENST00000364941 134 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 RHOT1P2-201ENST00000366423 333 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 RNU6-1293P-201ENST00000384077 107 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 MIR93-201ENST00000385024 80 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 FCF1P5-201ENST00000406490 482 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 SPTLC1P2-201ENST00000407089 121 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 RN7SKP100-201ENST00000411258 284 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 HMGB3P31-201ENST00000413333 595 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 NUP35P2-201ENST00000416748 943 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 CDY14P-201ENST00000431260 1014 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL627308.1-201ENST00000435693 821 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 PSMD10P3-201ENST00000437000 448 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 CDY12P-201ENST00000440679 1015 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 BTBD7P2-201ENST00000441962 620 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 CDY13P-201ENST00000445813 1015 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 CDY23P-201ENST00000451661 1014 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 CEACAMP6-201ENST00000452007 574 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 ISCUP1-201ENST00000454451 448 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC104763.1-201ENST00000475274 360 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 RN7SL177P-201ENST00000476596 299 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 RPS4XP14-201ENST00000493072 781 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 OR5M14P-201ENST00000506803 618 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 IGBP1P5-201ENST00000507524 1000 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF103-CHMP3A0A140T963 RN7SKP234-201ENST00000517173 224 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms