Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 AL353807.1-201ENST00000427475 662 ntBASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.87■□□□□ 0.93
GTF3C4Q9UKN8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF3C4Q9UKN8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 AP002982.1-201ENST00000492365 877 ntBASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 KRT18P16-201ENST00000510337 1294 ntBASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 CD177P1-201ENST00000606252 935 ntBASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.85■□□□□ 0.93
GTF3C4Q9UKN8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 FAM197Y1-201ENST00000421178 764 ntBASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 AC073195.1-201ENST00000607241 877 ntBASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF3C4Q9UKN8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 KRT17P2-201ENST00000300992 1314 ntBASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 TUBB8P6-201ENST00000436895 1288 ntBASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 AL353708.3-201ENST00000610272 989 ntBASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GTF3C4Q9UKN8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms