Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 KRT8P41-201ENST00000533985 1514 ntBASIC18.11■□□□□ 0.49
CHD8Q9HCK8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 MIR662-201ENST00000384847 95 ntBASIC18.11■□□□□ 0.49
CHD8Q9HCK8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 AC009065.1-201ENST00000564055 1225 ntBASIC18.11■□□□□ 0.49
CHD8Q9HCK8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD8Q9HCK8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 AF186996.4-201ENST00000467186 377 ntBASIC18.1■□□□□ 0.49
CHD8Q9HCK8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.1■□□□□ 0.49
CHD8Q9HCK8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 GPX1P2-201ENST00000429271 606 ntBASIC18.09■□□□□ 0.49
CHD8Q9HCK8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 AC083906.6-201ENST00000641366 219 ntBASIC18.09■□□□□ 0.49
CHD8Q9HCK8 AC079781.4-201ENST00000641908 219 ntBASIC18.09■□□□□ 0.49
CHD8Q9HCK8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHD8Q9HCK8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHD8Q9HCK8 AC106730.1-201ENST00000566722 1090 ntBASIC18.08■□□□□ 0.49
CHD8Q9HCK8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
CHD8Q9HCK8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHD8Q9HCK8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CHD8Q9HCK8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 C9orf163-202ENST00000624034 2573 ntBASIC18.08■□□□□ 0.48
CHD8Q9HCK8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD8Q9HCK8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD8Q9HCK8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms