Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist3h2bbQ8CGP0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 App-207ENSMUST00000227737 2827 ntBASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist3h2bbQ8CGP0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hist3h2bbQ8CGP0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Hist3h2bbQ8CGP0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hist3h2bbQ8CGP0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Sybu-209ENSMUST00000228639 4113 ntBASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist3h2bbQ8CGP0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms