Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT28Q7Z3Y7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT28Q7Z3Y7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 MIR3180-1-201ENST00000580374 94 ntBASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 MIR3180-3-201ENST00000584616 94 ntBASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
KRT28Q7Z3Y7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 CR769767.2-201ENST00000622735 460 ntBASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT28Q7Z3Y7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 TSSC2-201ENST00000450217 709 ntBASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 KRT17P6-201ENST00000453795 1220 ntBASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 AC111152.3-201ENST00000569699 673 ntBASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 AC016734.2-201ENST00000624325 1377 ntBASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 TBC1D3P2-202ENST00000577902 1649 ntBASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC26.27■■□□□ 1.8
KRT28Q7Z3Y7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 KRT8P10-201ENST00000450021 1447 ntBASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 AC004870.1-201ENST00000315132 882 ntBASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 RASA4DP-201ENST00000460726 1199 ntBASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KRT28Q7Z3Y7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.25■■□□□ 1.79
KRT28Q7Z3Y7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KRT28Q7Z3Y7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KRT28Q7Z3Y7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KRT28Q7Z3Y7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KRT28Q7Z3Y7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC26.24■■□□□ 1.79
KRT28Q7Z3Y7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms