Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GDNFP39905 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.86■□□□□ 0.29
GDNFP39905 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
GDNFP39905 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.86■□□□□ 0.29
GDNFP39905 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GDNFP39905 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.86■□□□□ 0.29
GDNFP39905 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.86■□□□□ 0.29
GDNFP39905 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.86■□□□□ 0.29
GDNFP39905 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.86■□□□□ 0.29
GDNFP39905 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDNFP39905 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GDNFP39905 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
GDNFP39905 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GDNFP39905 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.85■□□□□ 0.29
GDNFP39905 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.85■□□□□ 0.29
GDNFP39905 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.85■□□□□ 0.29
GDNFP39905 AC007322.4-201ENST00000509611 723 ntBASIC16.85■□□□□ 0.29
GDNFP39905 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.85■□□□□ 0.29
GDNFP39905 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GDNFP39905 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 AL591742.1-201ENST00000604433 565 ntBASIC16.85■□□□□ 0.29
GDNFP39905 FAM21FP-204ENST00000608637 956 ntBASIC16.85■□□□□ 0.29
GDNFP39905 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.85■□□□□ 0.29
GDNFP39905 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GDNFP39905 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.85■□□□□ 0.29
GDNFP39905 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.85■□□□□ 0.29
GDNFP39905 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
GDNFP39905 AL161938.1-201ENST00000569833 2180 ntBASIC16.85■□□□□ 0.29
GDNFP39905 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
GDNFP39905 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDNFP39905 FZD10-202ENST00000539839 3282 ntBASIC16.85■□□□□ 0.29
GDNFP39905 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 AC006333.2-201ENST00000607957 2099 ntBASIC16.84■□□□□ 0.29
GDNFP39905 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.84■□□□□ 0.29
GDNFP39905 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GDNFP39905 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.84■□□□□ 0.29
GDNFP39905 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 CDV3P1-201ENST00000471403 739 ntBASIC16.84■□□□□ 0.29
GDNFP39905 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
GDNFP39905 AL137784.2-201ENST00000607332 1000 ntBASIC16.84■□□□□ 0.29
GDNFP39905 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.84■□□□□ 0.29
GDNFP39905 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.84■□□□□ 0.29
GDNFP39905 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.84■□□□□ 0.29
GDNFP39905 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 AC068338.2-201ENST00000563278 1430 ntBASIC16.84■□□□□ 0.29
GDNFP39905 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.84■□□□□ 0.29
GDNFP39905 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.84■□□□□ 0.29
GDNFP39905 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GDNFP39905 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.84■□□□□ 0.29
GDNFP39905 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDNFP39905 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.83■□□□□ 0.29
GDNFP39905 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GDNFP39905 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GDNFP39905 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDNFP39905 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
GDNFP39905 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms