Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ERCC1P07992 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 AP001271.2-201ENST00000624018 1556 ntBASIC17.16■□□□□ 0.34
ERCC1P07992 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC1P07992 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC1P07992 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.16■□□□□ 0.34
ERCC1P07992 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC1P07992 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ERCC1P07992 AC008403.3-201ENST00000598924 454 ntBASIC17.16■□□□□ 0.34
ERCC1P07992 AL031963.3-201ENST00000606441 850 ntBASIC17.16■□□□□ 0.34
ERCC1P07992 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC1P07992 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC1P07992 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
ERCC1P07992 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ERCC1P07992 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ERCC1P07992 KRT8P20-201ENST00000423953 1409 ntBASIC17.15■□□□□ 0.34
ERCC1P07992 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC1P07992 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC1P07992 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 MIR718-201ENST00000390190 70 ntBASIC17.15■□□□□ 0.34
ERCC1P07992 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 AC098590.1-201ENST00000468126 897 ntBASIC17.15■□□□□ 0.34
ERCC1P07992 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.15■□□□□ 0.34
ERCC1P07992 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.15■□□□□ 0.34
ERCC1P07992 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC1P07992 C1QBPP2-201ENST00000528754 825 ntBASIC17.15■□□□□ 0.34
ERCC1P07992 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC1P07992 AC069544.1-201ENST00000609399 999 ntBASIC17.15■□□□□ 0.34
ERCC1P07992 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC1P07992 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC1P07992 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC1P07992 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
ERCC1P07992 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ERCC1P07992 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ERCC1P07992 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC1P07992 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
ERCC1P07992 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
ERCC1P07992 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.34
ERCC1P07992 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC1P07992 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ERCC1P07992 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
ERCC1P07992 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.14■□□□□ 0.33
ERCC1P07992 PRKY-204ENST00000533551 1019 ntBASIC17.14■□□□□ 0.33
ERCC1P07992 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC1P07992 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC1P07992 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.14■□□□□ 0.33
ERCC1P07992 Z82202.1-201ENST00000623446 1880 ntBASIC17.14■□□□□ 0.33
ERCC1P07992 AP000974.1-201ENST00000623909 2387 ntBASIC17.14■□□□□ 0.33
ERCC1P07992 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
ERCC1P07992 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.13■□□□□ 0.33
ERCC1P07992 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.13■□□□□ 0.33
ERCC1P07992 HLA-G-202ENST00000376815 851 ntBASIC17.13■□□□□ 0.33
ERCC1P07992 HLA-G-203ENST00000376818 1127 ntBASIC17.13■□□□□ 0.33
ERCC1P07992 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERCC1P07992 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms