Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.17□□□□□ -0.46
TcraP01849 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.17□□□□□ -0.46
TcraP01849 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TcraP01849 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TcraP01849 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.16□□□□□ -0.46
TcraP01849 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.16□□□□□ -0.46
TcraP01849 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.16□□□□□ -0.46
TcraP01849 Gm10033-202ENSMUST00000211874 928 ntBASIC12.16□□□□□ -0.46
TcraP01849 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.16□□□□□ -0.46
TcraP01849 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TcraP01849 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Sybu-209ENSMUST00000228639 4113 ntBASIC12.15□□□□□ -0.46
TcraP01849 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TcraP01849 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.15□□□□□ -0.46
TcraP01849 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
TcraP01849 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.15□□□□□ -0.46
TcraP01849 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TcraP01849 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.15□□□□□ -0.46
TcraP01849 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.15□□□□□ -0.46
TcraP01849 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 AV356131-201ENSMUST00000206201 750 ntBASIC12.15□□□□□ -0.46
TcraP01849 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TcraP01849 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.15□□□□□ -0.46
TcraP01849 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.15□□□□□ -0.46
TcraP01849 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.15□□□□□ -0.46
TcraP01849 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TcraP01849 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.15□□□□□ -0.46
TcraP01849 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
TcraP01849 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
TcraP01849 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.14□□□□□ -0.47
TcraP01849 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.14□□□□□ -0.47
TcraP01849 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.14□□□□□ -0.47
TcraP01849 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TcraP01849 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
TcraP01849 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
TcraP01849 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.14□□□□□ -0.47
TcraP01849 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms