Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNRC18O15417 MIR3687-1-201ENST00000614492 61 ntBASIC21.22■□□□□ 0.99
TNRC18O15417 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.22■□□□□ 0.99
TNRC18O15417 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNRC18O15417 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNRC18O15417 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNRC18O15417 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.21■□□□□ 0.99
TNRC18O15417 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 AC020928.2-201ENST00000588717 2197 ntBASIC21.21■□□□□ 0.99
TNRC18O15417 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TNRC18O15417 LINC01465-201ENST00000408887 1940 ntBASIC21.21■□□□□ 0.99
TNRC18O15417 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.21■□□□□ 0.99
TNRC18O15417 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TNRC18O15417 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.21■□□□□ 0.99
TNRC18O15417 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.21■□□□□ 0.99
TNRC18O15417 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.21■□□□□ 0.99
TNRC18O15417 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNRC18O15417 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.2■□□□□ 0.99
TNRC18O15417 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNRC18O15417 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNRC18O15417 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TNRC18O15417 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TNRC18O15417 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.2■□□□□ 0.98
TNRC18O15417 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.2■□□□□ 0.98
TNRC18O15417 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
TNRC18O15417 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TNRC18O15417 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.2■□□□□ 0.98
TNRC18O15417 KRT8P41-201ENST00000533985 1514 ntBASIC21.2■□□□□ 0.98
TNRC18O15417 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNRC18O15417 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNRC18O15417 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TNRC18O15417 MED15P5-201ENST00000423150 992 ntBASIC21.2■□□□□ 0.98
TNRC18O15417 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.2■□□□□ 0.98
TNRC18O15417 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNRC18O15417 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TNRC18O15417 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.19■□□□□ 0.98
TNRC18O15417 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.19■□□□□ 0.98
TNRC18O15417 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.19■□□□□ 0.98
TNRC18O15417 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
TNRC18O15417 RNF126P1-202ENST00000569893 925 ntBASIC21.19■□□□□ 0.98
TNRC18O15417 AP005901.3-202ENST00000581653 237 ntBASIC21.19■□□□□ 0.98
TNRC18O15417 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TNRC18O15417 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.19■□□□□ 0.98
TNRC18O15417 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TNRC18O15417 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.19■□□□□ 0.98
TNRC18O15417 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 KRT18P28-201ENST00000453838 1332 ntBASIC21.19■□□□□ 0.98
TNRC18O15417 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TNRC18O15417 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.19■□□□□ 0.98
TNRC18O15417 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.18■□□□□ 0.98
TNRC18O15417 HLA-V-201ENST00000429037 534 ntBASIC21.18■□□□□ 0.98
TNRC18O15417 AL591424.1-201ENST00000442569 1213 ntBASIC21.18■□□□□ 0.98
TNRC18O15417 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.18■□□□□ 0.98
TNRC18O15417 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.18■□□□□ 0.98
TNRC18O15417 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.18■□□□□ 0.98
TNRC18O15417 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.18■□□□□ 0.98
TNRC18O15417 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 ZNF259P1-201ENST00000407656 1365 ntBASIC21.18■□□□□ 0.98
TNRC18O15417 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.18■□□□□ 0.98
TNRC18O15417 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
TNRC18O15417 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.18■□□□□ 0.98
TNRC18O15417 AC034105.1-201ENST00000563488 319 ntBASIC21.18■□□□□ 0.98
TNRC18O15417 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.18■□□□□ 0.98
TNRC18O15417 AC018553.1-201ENST00000616682 1458 ntBASIC21.18■□□□□ 0.98
TNRC18O15417 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNRC18O15417 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNRC18O15417 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.17■□□□□ 0.98
TNRC18O15417 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNRC18O15417 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.17■□□□□ 0.98
TNRC18O15417 SCARNA2-201ENST00000458748 420 ntBASIC21.17■□□□□ 0.98
TNRC18O15417 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.17■□□□□ 0.98
TNRC18O15417 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.17■□□□□ 0.98
TNRC18O15417 AL356488.2-201ENST00000602755 427 ntBASIC21.17■□□□□ 0.98
TNRC18O15417 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.17■□□□□ 0.98
TNRC18O15417 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.17■□□□□ 0.98
TNRC18O15417 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.17■□□□□ 0.98
TNRC18O15417 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNRC18O15417 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms