Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.3■□□□□ 0.84
XIRP2A4UGR9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XIRP2A4UGR9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XIRP2A4UGR9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
XIRP2A4UGR9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.3■□□□□ 0.84
XIRP2A4UGR9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.3■□□□□ 0.84
XIRP2A4UGR9 MIR574-201ENST00000385209 96 ntBASIC20.3■□□□□ 0.84
XIRP2A4UGR9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
XIRP2A4UGR9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XIRP2A4UGR9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XIRP2A4UGR9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 AC004870.1-201ENST00000315132 882 ntBASIC20.29■□□□□ 0.84
XIRP2A4UGR9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 AL160237.2-201ENST00000556165 472 ntBASIC20.29■□□□□ 0.84
XIRP2A4UGR9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 AC120114.3-201ENST00000611923 658 ntBASIC20.29■□□□□ 0.84
XIRP2A4UGR9 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.29■□□□□ 0.84
XIRP2A4UGR9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XIRP2A4UGR9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 CA15P1-201ENST00000481698 905 ntBASIC20.28■□□□□ 0.84
XIRP2A4UGR9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XIRP2A4UGR9 BX640515.1-201ENST00000617215 977 ntBASIC20.28■□□□□ 0.84
XIRP2A4UGR9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 TSPY19P-201ENST00000418461 509 ntBASIC20.27■□□□□ 0.84
XIRP2A4UGR9 TSPY18P-201ENST00000441642 509 ntBASIC20.27■□□□□ 0.84
XIRP2A4UGR9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XIRP2A4UGR9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 KRT18P31-201ENST00000506277 1292 ntBASIC20.26■□□□□ 0.83
XIRP2A4UGR9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XIRP2A4UGR9 MRPL3P1-201ENST00000400109 1033 ntBASIC20.26■□□□□ 0.83
XIRP2A4UGR9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 AC117500.6-201ENST00000624871 588 ntBASIC20.25■□□□□ 0.83
XIRP2A4UGR9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XIRP2A4UGR9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms