Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 RPL5P13-201ENST00000462840 709 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 RN7SL443P-201ENST00000464331 290 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 COX6B1P5-201ENST00000509843 249 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 OR5H4P-201ENST00000510851 923 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 SNORA31.13-201ENST00000516624 135 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 OR5AZ1P-201ENST00000527448 943 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 MIR7853-201ENST00000584820 132 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AL163642.2-201ENST00000604722 1019 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC064872.1-201ENST00000604823 1072 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 FAM25E-202ENST00000608562 189 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 MIR6820-201ENST00000611508 62 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AL133243.1-201ENST00000614487 366 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 Z69908.1-201ENST00000622603 247 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC091953.3-201ENST00000623220 236 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC079248.2-201ENST00000623779 326 ntBASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CTDP1Q9Y5B0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 MTCO1P18-201ENST00000455518 1419 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 RN7SKP104-201ENST00000362605 328 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 Y_RNA.77-201ENST00000362962 107 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 Y_RNA.194-201ENST00000363985 102 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 RNU6-413P-201ENST00000384115 107 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 MIR589-201ENST00000385238 99 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 MT-TP-201ENST00000387461 68 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 ERHP2-201ENST00000402323 299 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 Z75741.2-201ENST00000417272 1167 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 RPL7P53-201ENST00000421245 739 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 RAC1P8-201ENST00000427086 527 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 MOB1AP1-201ENST00000430903 535 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 COX7BP2-201ENST00000437976 242 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AL157827.1-201ENST00000447622 132 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 RPL31P44-201ENST00000447680 377 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC233982.1-201ENST00000451247 436 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 HMGB1P5-202ENST00000451497 985 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 MRPL42P4-201ENST00000453267 443 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 MTCO2P18-201ENST00000457151 658 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC096741.1-201ENST00000472250 846 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC140172.1-201ENST00000502928 141 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 RNU6-232P-201ENST00000517144 64 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 IGHV3-63-201ENST00000518422 341 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 NMNAT1P1-201ENST00000554095 876 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 MIR4691-201ENST00000583764 85 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 DUXAP11-201ENST00000603858 526 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC011626.1-201ENST00000604710 562 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC004492.1-201ENST00000607036 742 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 MIR6748-201ENST00000610433 71 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 AC092159.4-201ENST00000624944 550 ntBASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTDP1Q9Y5B0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms