Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL512329.2-201ENST00000607350 548 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC211486.4-201ENST00000621495 113 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC005514.1-201ENST00000623521 208 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC091953.2-201ENST00000623979 160 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC104966.1-201ENST00000467010 1464 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC125603.4-201ENST00000621942 2699 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 CTAGE11P-201ENST00000451540 2353 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC005839.1-201ENST00000624148 3213 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC010894.1-201ENST00000313760 361 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AL360182.1-201ENST00000397433 468 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AL391419.1-201ENST00000398901 1275 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 RNU2-36P-201ENST00000410361 191 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC092634.6-201ENST00000418558 192 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 FAM183DP-201ENST00000421987 399 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC011816.1-201ENST00000441346 546 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 NEFMP1-201ENST00000443423 1006 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC073910.1-201ENST00000445047 438 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 RPL7P59-201ENST00000447700 943 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 RPS3AP46-201ENST00000448352 682 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 RPL7AP23-201ENST00000482625 776 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 RN7SL561P-201ENST00000488553 281 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 ALDH7A1P3-201ENST00000492517 345 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 CEACAMP10-202ENST00000495431 496 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 HSPD1P15-201ENST00000505573 1122 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 RNA5SP318-201ENST00000516352 92 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 SCARNA24.1-201ENST00000516465 137 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 RNU7-51P-201ENST00000516560 62 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 Z98751.3-201ENST00000604447 521 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC022467.1-201ENST00000614738 749 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC008013.2-202ENST00000637965 364 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AC099654.15-201ENST00000639802 509 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 AL359922.2-201ENST00000581788 3017 ntBASIC8.8□□□□□ -1
TRIM35Q9UPQ4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.8□□□□□ -1
TRIM35Q9UPQ4 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 MAPK10-383ENST00000642032 3390 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 RNA5SP321-201ENST00000362722 111 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 RNA5SP140-201ENST00000364524 92 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 Y_RNA.274-201ENST00000364714 101 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 Y_RNA.485-201ENST00000384395 102 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 Y_RNA.518-201ENST00000384552 113 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 MIR1266-201ENST00000408125 84 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 RNA5SP345-201ENST00000410646 108 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AL731534.1-201ENST00000434711 269 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 RPS27AP15-201ENST00000447672 466 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC112492.4-201ENST00000456549 352 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 RPL7P43-201ENST00000478876 753 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 AC114801.2-201ENST00000503825 781 ntBASIC8.79□□□□□ -1
TRIM35Q9UPQ4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC8.79□□□□□ -1
TRIM35Q9UPQ4 RNU6-256P-201ENST00000516747 97 ntBASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms