Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL117339.2-201ENST00000430475 180 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 PTMAP3-201ENST00000447474 330 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 AC239798.3-201ENST00000454459 408 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 OR7L1P-201ENST00000456181 380 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 RPL23AP2-201ENST00000471227 466 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 RNA5SP143-201ENST00000516936 115 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 AC090246.1-201ENST00000616499 426 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 AL773545.4-201ENST00000637262 310 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 AL513478.4-201ENST00000641636 310 ntBASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.44□□□□□ -1.54
NPC1L1Q9UHC9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 RHOT1P2-201ENST00000366423 333 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 MT-RNR1-201ENST00000389680 954 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 SNORA3C-201ENST00000408792 125 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 RNA5SP44-201ENST00000410446 133 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 AL691449.1-201ENST00000426570 421 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 RN7SL132P-201ENST00000478131 296 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 RPL7P24-201ENST00000493052 752 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 AC091917.2-201ENST00000505002 744 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 IGHV3-63-201ENST00000518422 341 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 AC084033.1-201ENST00000550830 633 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 AC095038.2-201ENST00000621464 1070 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 KPNA2P2-201ENST00000419546 1489 ntBASIC5.43□□□□□ -1.54
NPC1L1Q9UHC9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 MIR554-201ENST00000384874 96 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 MIR93-201ENST00000385024 80 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 MIR199A2-201ENST00000385289 110 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 SNRPFP2-201ENST00000440710 251 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC006326.1-201ENST00000445465 787 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC025445.1-201ENST00000502728 300 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 RNU1-45P-201ENST00000517191 141 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AGGF1P6-201ENST00000569213 976 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 Y_RNA.62-201ENST00000362840 99 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 SNORA70.4-201ENST00000365509 134 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 RNU6-213P-201ENST00000384051 104 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC016687.1-201ENST00000482574 353 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 MTND4LP31-201ENST00000514859 294 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 AC015813.4-201ENST00000610469 179 ntBASIC5.42□□□□□ -1.54
NPC1L1Q9UHC9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 SNORD35B-201ENST00000363660 87 ntBASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 SNORA62.3-201ENST00000365110 153 ntBASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.41□□□□□ -1.54
NPC1L1Q9UHC9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms