Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AC069277.2-201ENST00000454211 432 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 RPS20P4-201ENST00000461659 355 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AC006499.6-201ENST00000511169 607 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 KCTD9P2-201ENST00000512203 1013 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 VTA1P2-201ENST00000520205 911 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 IFITM8P-201ENST00000522529 394 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AL352979.3-201ENST00000553515 247 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AC009268.1-201ENST00000561352 1203 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 CYP4A43P-201ENST00000568156 121 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 SNX6P1-201ENST00000601728 1224 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AL161729.3-201ENST00000603533 673 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AC007546.1-201ENST00000619452 559 ntBASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.04□□□□□ -1.6
CLIP2Q9UDT6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AC007342.7-201ENST00000624610 2337 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 RPS27AP11-201ENST00000402798 447 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 MIR1193-201ENST00000408109 78 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AC099336.2-201ENST00000422457 254 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 RPS26P47-201ENST00000427219 348 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 MTCO1P45-201ENST00000431457 267 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AC099560.2-201ENST00000457554 255 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 RPS7P7-201ENST00000463499 571 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 RPL23AP97-201ENST00000568955 471 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 MTATP6P25-201ENST00000574491 261 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AC067959.1-201ENST00000604334 379 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AC019131.2-201ENST00000609071 870 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 ZYXP1-201ENST00000617638 118 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 AL133370.2-201ENST00000619934 439 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 MIR8059-201ENST00000620427 81 ntBASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLIP2Q9UDT6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 DHFRP5-201ENST00000406944 564 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 RNA5SP104-201ENST00000410989 118 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 CEACAMP1-201ENST00000434624 1035 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 OR4C10P-201ENST00000434991 931 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AC114755.5-201ENST00000447760 831 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 CLIC4P1-201ENST00000453177 535 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AC079804.1-201ENST00000461922 436 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 RNA5SP73-201ENST00000516744 108 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 MIR3160-1-201ENST00000577972 85 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 RN7SL600P-201ENST00000581811 299 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AL591034.3-201ENST00000605511 685 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AL031666.3-201ENST00000609320 1006 ntBASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms