Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC026523.2-201ENST00000625039 7739 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC098592.2-201ENST00000413158 265 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AL358472.1-201ENST00000431295 329 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 Z95327.1-201ENST00000446082 482 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC025554.1-201ENST00000505641 188 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 KRT19P6-201ENST00000510983 209 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 OR5M7P-201ENST00000526140 972 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC007599.1-201ENST00000568688 1174 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC245389.1-201ENST00000605141 529 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 MIR7702-201ENST00000621931 59 ntBASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.94□□□□□ -1.62
SALL1Q9NSC2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 RNU4-6P-201ENST00000410804 122 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AL691449.1-201ENST00000426570 421 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 RPL23AP89-201ENST00000439324 255 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 XKRYP6-201ENST00000440468 1116 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 XKRYP3-201ENST00000442113 1116 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 RPS4XP4-201ENST00000443195 763 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AC107015.1-201ENST00000466902 747 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 SEPT7P6-201ENST00000469999 1143 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 SAP18P1-201ENST00000512058 390 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 NPM1P41-201ENST00000512920 831 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AL049874.4-201ENST00000557593 255 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 MIR6500-201ENST00000622700 86 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 AC015813.6-201ENST00000624409 5808 ntBASIC4.93□□□□□ -1.62
SALL1Q9NSC2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL1Q9NSC2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 AC139713.2-215ENST00000641428 5037 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 RNU6-213P-201ENST00000384051 104 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 RNU6-891P-201ENST00000384280 111 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 RN7SKP159-201ENST00000410657 292 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 HMGB3P10-201ENST00000434734 572 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 OR6C72P-201ENST00000451403 892 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 AC091959.2-201ENST00000477363 321 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 AP002812.1-201ENST00000495378 474 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.92□□□□□ -1.62
SALL1Q9NSC2 MTCO1P49-201ENST00000523429 802 ntBASIC4.92□□□□□ -1.62
SALL1Q9NSC2 MTND1P6-201ENST00000523621 946 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms