Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 UQCRHP4-201ENST00000471686 272 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 METTL15P1-201ENST00000481421 1045 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 PPM1AP1-201ENST00000502740 1135 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 RNU6-1308P-201ENST00000516817 103 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AP003730.1-201ENST00000524605 285 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 RN7SL176P-201ENST00000580352 264 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 VN1R85P-201ENST00000601587 426 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AC007423.1-201ENST00000605009 627 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 OR6R2P-201ENST00000609216 300 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AC024941.1-201ENST00000612250 334 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AC140113.4-201ENST00000622087 222 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 AC006065.6-201ENST00000625201 545 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 LINC00622-201ENST00000562811 1570 ntBASIC4.61□□□□□ -1.67
HPS4Q9NQG7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS4Q9NQG7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AL589826.1-201ENST00000340697 249 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 RNA5SP388-201ENST00000362584 119 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 RNU1-94P-201ENST00000362627 173 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 RNU6-40P-201ENST00000384254 107 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 RNU6-532P-201ENST00000384318 107 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 RNA5SP372-201ENST00000390836 115 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 RN7SKP222-201ENST00000410651 315 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 RANP4-201ENST00000413361 655 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 OR4C10P-201ENST00000434991 931 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC122718.1-201ENST00000439448 744 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 MTCYBP12-201ENST00000440559 1134 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 TDGF1P1-201ENST00000445734 527 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC104651.2-201ENST00000447549 528 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 FAM133DP-201ENST00000464802 691 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 STMN1P2-201ENST00000508435 439 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 HMGB1P46-201ENST00000520062 610 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 HIGD1AP18-201ENST00000520730 278 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 SMARCE1P4-201ENST00000523647 241 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC074050.1-201ENST00000563247 211 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 MTCO3P22-201ENST00000603219 784 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC113403.1-201ENST00000604910 193 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC009318.3-201ENST00000616916 503 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 MIR6891-201ENST00000618788 93 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 AC119674.1-212ENST00000641155 993 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 USP9YP4-201ENST00000424401 1745 ntBASIC4.6□□□□□ -1.67
HPS4Q9NQG7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HPS4Q9NQG7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 MIR331-201ENST00000362302 94 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 MIR195-201ENST00000385194 87 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 RPS26P8-201ENST00000393490 348 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AL080315.1-201ENST00000406055 466 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 RN7SKP27-201ENST00000410684 333 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AL450992.3-201ENST00000413192 568 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 FAM204CP-201ENST00000424489 642 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 MTND4LP14-201ENST00000429447 288 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 MTND2P21-201ENST00000436242 1042 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 BTBD7P2-201ENST00000441962 620 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 RPL7P33-201ENST00000444159 742 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AC114755.5-201ENST00000447760 831 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 RN7SL817P-201ENST00000480777 288 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms