Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
KIAA1549Q9HCM3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KIAA1549Q9HCM3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
KIAA1549Q9HCM3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC3.59□□□□□ -1.84
KIAA1549Q9HCM3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 RPSAP41-201ENST00000439695 860 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC104306.1-201ENST00000449702 371 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC110792.1-201ENST00000491826 472 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 KPNA2P2-201ENST00000419546 1489 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC087190.4-201ENST00000574616 8334 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 MIR554-201ENST00000384874 96 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 NPM1P47-201ENST00000560843 856 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC079171.1-201ENST00000568788 914 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 AC034229.5-201ENST00000624258 185 ntBASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
KIAA1549Q9HCM3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 AL356274.2-201ENST00000624379 3752 ntBASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 LINC01881-201ENST00000416103 412 ntBASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 BMS1P19-201ENST00000433925 393 ntBASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 RPL5P32-201ENST00000454085 879 ntBASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 SEPT7P3-201ENST00000455017 621 ntBASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 AC022034.3-201ENST00000471393 478 ntBASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 AC025445.1-201ENST00000502728 300 ntBASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 AC093775.1-201ENST00000624154 1868 ntBASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
KIAA1549Q9HCM3 OR4A15-201ENST00000314706 1035 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC233289.1-201ENST00000403700 508 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 HDGFP1-201ENST00000405943 252 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 PGBD4P8-201ENST00000412993 562 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 YWHAEP5-201ENST00000431545 765 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 RPL23AP12-201ENST00000467573 473 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC087369.1-201ENST00000520775 996 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC008011.1-201ENST00000545989 227 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC053481.3-201ENST00000577881 843 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC005255.1-201ENST00000593748 216 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC074140.1-201ENST00000621617 208 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AC124312.6-202ENST00000623624 418 ntBASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KIAA1549Q9HCM3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms