Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 DOCK11P1-201ENST00000553480 5932 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AL356968.2-201ENST00000412769 1257 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 RPS29P4-201ENST00000414733 161 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 MTND2P15-201ENST00000418575 892 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AC097713.2-201ENST00000430199 356 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AC092691.2-201ENST00000461787 803 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AC011825.1-201ENST00000484967 388 ntBASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CHD8Q9HCK8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AL445529.1-201ENST00000398713 389 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 MIR887-201ENST00000401258 79 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC005326.1-201ENST00000429197 123 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 RPS3AP46-201ENST00000448352 682 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC005726.1-201ENST00000494679 427 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC135001.1-201ENST00000544546 283 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC091516.1-201ENST00000549191 703 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 RNU1-63P-201ENST00000383902 164 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC062016.2-201ENST00000420950 676 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 CKS1BP6-201ENST00000424932 240 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC133134.1-201ENST00000466800 359 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 NXPH1-205ENST00000602349 1953 ntBASIC3.75□□□□□ -1.81
CHD8Q9HCK8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHD8Q9HCK8 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AC125257.1-201ENST00000560400 2930 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 Y_RNA.226-201ENST00000364337 114 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AL035423.1-201ENST00000420331 213 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 TCEA1P2-201ENST00000420496 906 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AL590399.2-201ENST00000427536 309 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AC073387.1-201ENST00000453261 709 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 KRT19P6-201ENST00000510983 209 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AC010342.1-201ENST00000514047 877 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AC107993.1-201ENST00000591343 684 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AC138932.5-201ENST00000617759 563 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AL359922.3-201ENST00000624779 1670 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 COX5BP7-201ENST00000414780 274 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 Z74696.2-201ENST00000436514 498 ntBASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHD8Q9HCK8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms