Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RNA5SP455-201ENST00000365190 119 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 OR1L1-202ENST00000373686 1083 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 RNU6-171P-201ENST00000384354 107 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AP000580.1-201ENST00000404439 358 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 RNA5SP345-201ENST00000410646 108 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 RN7SKP97-201ENST00000410966 333 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 PAICSP7-201ENST00000419829 962 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 HIGD1AP12-201ENST00000427832 281 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 MTND2P5-201ENST00000432656 1006 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 NMNAT1P2-201ENST00000435192 860 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC000111.2-201ENST00000448200 210 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 PPIAP20-201ENST00000449839 135 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 RN7SL319P-201ENST00000480656 221 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC138938.1-201ENST00000515431 782 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC023632.1-201ENST00000518463 375 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AP001372.4-201ENST00000524889 472 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC090022.1-201ENST00000546569 311 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 MIR4489-201ENST00000578869 62 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC022069.1-201ENST00000582910 658 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 MIR3936-201ENST00000584304 110 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC006116.3-201ENST00000592968 361 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC106052.1-201ENST00000608029 497 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC093799.2-201ENST00000610062 578 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 MIR8069-1-201ENST00000616627 86 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC010975.3-201ENST00000618727 978 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC009704.2-201ENST00000618739 483 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 MIR8069-2-201ENST00000621412 86 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AP000770.2-201ENST00000623694 100 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 CR381572.2-201ENST00000624852 397 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC087821.2-201ENST00000637086 450 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AL049555.1-201ENST00000562834 1933 ntBASIC4.7□□□□□ -1.66
BRF2Q9HAW0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRF2Q9HAW0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 Z95327.2-201ENST00000414579 1873 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC005261.4-201ENST00000600047 1385 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 HMGB1P5-201ENST00000255320 642 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 RPL23P2-201ENST00000320371 421 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC008549.2-201ENST00000333482 706 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 RNU6-906P-201ENST00000384700 70 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 U3.35-201ENST00000408405 208 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC073136.2-201ENST00000417282 849 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AF186996.5-201ENST00000418098 904 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 RPL36AP10-201ENST00000421785 322 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 RHOT1P3-201ENST00000436571 331 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 PPIAP17-201ENST00000438507 471 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 NPM1P33-201ENST00000438918 872 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AL163193.1-201ENST00000444895 788 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AL591473.1-201ENST00000464297 313 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms