Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RPS5P7-201ENST00000456664 608 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
EBF3Q9H4W6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AK3P4-201ENST00000504283 583 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5□□□□□ -1.61
EBF3Q9H4W6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AC133555.2-201ENST00000550213 292 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5□□□□□ -1.61
EBF3Q9H4W6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AL049839.1-201ENST00000556151 657 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AL390334.1-201ENST00000556395 450 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5□□□□□ -1.61
EBF3Q9H4W6 MIR4284-201ENST00000578924 81 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AC022726.1-201ENST00000587475 207 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AC010424.2-201ENST00000607594 443 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5□□□□□ -1.61
EBF3Q9H4W6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5□□□□□ -1.61
EBF3Q9H4W6 AC006927.2-201ENST00000639256 389 ntBASIC5□□□□□ -1.61
EBF3Q9H4W6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5□□□□□ -1.61
EBF3Q9H4W6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
EBF3Q9H4W6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5□□□□□ -1.61
EBF3Q9H4W6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5□□□□□ -1.61
EBF3Q9H4W6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 GSTA12P-201ENST00000402398 508 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 UBE2V1P11-201ENST00000411559 285 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 FABP7P1-201ENST00000424004 391 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 RPL18P10-201ENST00000425606 538 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 HIGD1AP4-201ENST00000430194 280 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 USP9YP24-201ENST00000434374 697 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 RPS7P2-201ENST00000435134 607 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC016831.4-201ENST00000438302 307 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 USP9YP17-201ENST00000444617 696 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 RPL6P5-201ENST00000445678 828 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 RPS17P2-201ENST00000461663 408 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC112206.1-201ENST00000468416 477 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC134050.1-201ENST00000495088 933 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 SCARNA22-201ENST00000503991 125 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC113420.1-201ENST00000507903 571 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 RN7SKP46-201ENST00000515942 234 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 BUD31P1-201ENST00000521828 359 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AP000859.1-201ENST00000525536 307 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 OR10V3P-201ENST00000525712 725 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC027807.1-201ENST00000559921 996 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC109446.2-201ENST00000567872 497 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AP000919.1-202ENST00000581139 1264 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC093765.1-201ENST00000603758 881 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AL353600.1-201ENST00000608148 251 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 VN1R9P-201ENST00000614184 867 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 MIR8069-1-201ENST00000616627 86 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 MIR8069-2-201ENST00000621412 86 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 AC083865.1-201ENST00000636634 831 ntBASIC4.99□□□□□ -1.61
EBF3Q9H4W6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
EBF3Q9H4W6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 274.5 ms