Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AC110792.1-201ENST00000491826 472 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AP000926.3-201ENST00000497201 299 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 STMN1P2-201ENST00000508435 439 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 TRAV11-201ENST00000539512 339 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 RPL23AP87-202ENST00000573039 466 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AC110743.1-201ENST00000584870 478 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AC233280.2-201ENST00000603917 1070 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 MIR6868-201ENST00000611215 58 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 LINC01109-201ENST00000603837 3081 ntBASIC4.43□□□□□ -1.7
NXF3Q9H4D5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NXF3Q9H4D5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC019155.1-201ENST00000382242 574 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 RN7SKP27-201ENST00000410684 333 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 RNA5SP146-201ENST00000410743 123 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC239367.2-201ENST00000447309 705 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 MTCYBP14-201ENST00000457471 715 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 RPL29P14-201ENST00000495837 428 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC008676.3-201ENST00000521237 435 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 IFITM8P-201ENST00000522529 394 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC011270.1-201ENST00000558606 583 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC034105.4-201ENST00000568304 277 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC120057.2-201ENST00000571520 271 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AL606490.9-201ENST00000603331 271 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC090246.1-201ENST00000616499 426 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC138907.10-201ENST00000623708 983 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 Z82217.1-201ENST00000625157 8149 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 AC090971.4-201ENST00000560291 1800 ntBASIC4.42□□□□□ -1.7
NXF3Q9H4D5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.42□□□□□ -1.7
NXF3Q9H4D5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 SNORA60-201ENST00000362396 134 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 RPS11P1-201ENST00000451072 473 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 RPS4XP15-201ENST00000489210 795 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC113398.2-201ENST00000507630 558 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 RNU7-143P-201ENST00000516781 65 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC022784.5-201ENST00000522241 437 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC025627.2-201ENST00000576220 160 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC006130.2-201ENST00000586202 326 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AL451044.1-201ENST00000604867 238 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 NF1P10-201ENST00000613227 742 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms