Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TPMTP1-201ENST00000592307 737 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AL133338.2-201ENST00000604292 736 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC018889.1-201ENST00000605372 397 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AL121612.2-201ENST00000612261 482 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AL354950.2-201ENST00000617939 290 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AL450226.2-201ENST00000622913 439 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC091903.1-201ENST00000624322 454 ntBASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
COL25A1Q9BXS0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 NBPF8-201ENST00000583271 5330 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC016582.1-202ENST00000636341 2982 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 SUGT1P1-201ENST00000379514 476 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 Y_RNA.455-201ENST00000384230 98 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RPL23AP32-201ENST00000395315 459 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 MRPL42P2-201ENST00000403169 426 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 OR51A3P-201ENST00000413596 924 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC127526.1-201ENST00000417526 366 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AL606753.1-201ENST00000427435 87 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RBMY2QP-201ENST00000429799 1147 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AL161722.2-201ENST00000434731 981 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 FABP5P14-201ENST00000437273 393 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RPS15AP9-201ENST00000439856 381 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC092809.1-201ENST00000441469 474 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AL136380.1-201ENST00000447970 162 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RPL7P15-201ENST00000461190 712 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RPS17P15-201ENST00000475609 349 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC013356.1-201ENST00000489027 564 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RPL22P13-201ENST00000493291 347 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC106872.2-201ENST00000494303 480 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RNU6-408P-201ENST00000515910 100 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 RNU6-1261P-201ENST00000517194 104 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC087854.1-201ENST00000519706 414 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 POLR2KP1-201ENST00000553226 168 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AP003115.1-201ENST00000569849 463 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 MIR4646-201ENST00000580775 63 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC068020.1-201ENST00000594215 661 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC130352.1-201ENST00000602979 661 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC111186.1-201ENST00000604684 130 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AL512329.2-201ENST00000607350 548 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC007485.1-201ENST00000616755 206 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 uc_338.11-201ENST00000619132 160 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AL136228.1-201ENST00000622221 319 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC006020.1-201ENST00000420179 1854 ntBASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL25A1Q9BXS0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms