Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC063950.1-201ENST00000552036 308 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 MIR4512-201ENST00000583257 77 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 MIR4737-201ENST00000583979 81 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AP001160.4-201ENST00000596971 382 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 GMCL1P2-201ENST00000605230 823 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AC007546.1-201ENST00000619452 559 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 AC004943.3-201ENST00000624116 600 ntBASIC3.09□□□□□ -1.91
AP1S3Q96PC3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
AP1S3Q96PC3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
AP1S3Q96PC3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
AP1S3Q96PC3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.09□□□□□ -1.92
AP1S3Q96PC3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
AP1S3Q96PC3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 ASNSP1-204ENST00000641977 1664 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 RNU6-1331P-201ENST00000363658 106 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 EI24P2-201ENST00000397776 1076 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 RN7SKP106-201ENST00000410832 272 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 NFYAP1-201ENST00000431953 972 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC011998.1-201ENST00000433403 117 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 RPL23AP46-201ENST00000438548 490 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC083863.1-201ENST00000438811 231 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 RPL12P11-201ENST00000439970 501 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 DNAJC19P1-201ENST00000455312 319 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 RPL36AP13-201ENST00000457490 317 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC053481.1-201ENST00000467217 306 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC096741.1-201ENST00000472250 846 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC004815.1-201ENST00000484185 331 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC008953.1-201ENST00000497334 318 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 OR5M2P-201ENST00000529003 936 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AL161713.1-201ENST00000555538 145 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC027176.2-201ENST00000559166 746 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC106785.3-201ENST00000564064 847 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 MIR4458-201ENST00000578872 75 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC069061.3-201ENST00000582254 823 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC020910.2-201ENST00000603635 610 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC103710.3-201ENST00000608157 948 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AL096803.3-201ENST00000609032 532 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC064801.1-201ENST00000612025 407 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AP005264.7-201ENST00000625003 745 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 AC132825.1-201ENST00000463573 2247 ntBASIC3.08□□□□□ -1.92
AP1S3Q96PC3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
AP1S3Q96PC3 LINC00561-201ENST00000565815 2738 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 CEP170P1-201ENST00000502249 4587 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 RNU6-304P-201ENST00000364855 107 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 U3.15-201ENST00000365398 212 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC127526.1-201ENST00000417526 366 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 UQCRBP1-201ENST00000421129 336 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC073464.3-201ENST00000422564 712 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 FAR2P4-202ENST00000425399 584 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 RPL23AP4-201ENST00000427757 463 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 MTCO1P54-201ENST00000430139 712 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 ATP5HP2-201ENST00000433885 485 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 LYPLA1P1-201ENST00000434514 622 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC096638.2-201ENST00000434965 711 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 RPL12P26-201ENST00000452430 487 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC004801.2-202ENST00000463559 283 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 MTND6P6-201ENST00000478031 263 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 RPS29P19-201ENST00000479709 171 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 Vault.1-201ENST00000516474 102 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AP000827.1-201ENST00000527814 258 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 OR4C2P-201ENST00000530855 1064 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 MIR3934-201ENST00000579806 107 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.07□□□□□ -1.92
AP1S3Q96PC3 PSMA6P4-201ENST00000603247 718 ntBASIC3.07□□□□□ -1.92
AP1S3Q96PC3 AC116651.1-201ENST00000609724 556 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms