Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL606537.1-201ENST00000607258 2011 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 DBF4P1-201ENST00000412976 1892 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL353743.4-201ENST00000422653 1547 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL390862.1-201ENST00000635467 1469 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC092376.2-201ENST00000622621 4116 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL391994.1-201ENST00000254724 282 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 SNORA17.1-201ENST00000362945 126 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 RNU6-839P-201ENST00000363347 108 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 SNORD116-4-201ENST00000384733 96 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 MIR217-201ENST00000384817 110 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 MIR223-201ENST00000385204 110 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL138880.1-201ENST00000405824 642 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC002524.1-201ENST00000411687 547 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC048351.1-201ENST00000420064 602 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 HMGN2P27-201ENST00000427352 270 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC022431.1-201ENST00000450941 438 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 MTCO3P11-201ENST00000455103 774 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 HMGB1P4-201ENST00000455362 567 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 RPL7AP52-201ENST00000458096 790 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC072052.1-201ENST00000496556 306 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 HIGD1AP14-201ENST00000507617 282 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 MTCO3P7-201ENST00000510008 774 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC048346.1-201ENST00000510247 144 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 RNA5SP92-201ENST00000516437 110 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 RNA5SP135-201ENST00000517019 125 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC027308.1-201ENST00000517993 110 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC008562.1-201ENST00000521763 330 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC018442.3-201ENST00000523025 183 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AP003033.1-201ENST00000527244 415 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL121766.1-201ENST00000547436 487 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC016180.1-201ENST00000567945 403 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC103987.3-201ENST00000582071 292 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 PRPF19P1-201ENST00000584766 898 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 VN1R90P-201ENST00000595717 726 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC119751.7-201ENST00000600494 245 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC103881.1-201ENST00000603476 538 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC073114.1-201ENST00000612027 490 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC016769.4-201ENST00000616893 535 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 AC091965.5-201ENST00000624785 342 ntBASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTHRC1Q96CG8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.84□□□□□ -1.64
CTHRC1Q96CG8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CTHRC1Q96CG8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CTHRC1Q96CG8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CTHRC1Q96CG8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CTHRC1Q96CG8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 DDX43P2-201ENST00000604753 1354 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 RNU1-43P-201ENST00000365052 165 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 MIR105-2-201ENST00000385083 81 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms