Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC011447.7-201ENST00000624228 1590 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC114546.3-201ENST00000623582 1734 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AP005901.5-201ENST00000545779 1796 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 RNU6-413P-201ENST00000384115 107 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 MIR223-201ENST00000385204 110 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 GSTA8P-201ENST00000404253 637 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 U3.32-201ENST00000408116 212 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 RN7SKP114-201ENST00000410327 279 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 ELOCP9-201ENST00000418624 239 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC010099.3-201ENST00000423896 409 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 RPL21P43-201ENST00000425440 472 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 MTCO1P3-201ENST00000429327 192 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 KNOP1P3-201ENST00000446933 426 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 HMGB1P16-201ENST00000447155 540 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AURKAPS1-201ENST00000451805 1212 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AL389915.2-201ENST00000454576 441 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 RPS4XP1-201ENST00000482189 787 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 RN7SL30P-201ENST00000488416 306 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 OR4C2P-201ENST00000530855 1064 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC004217.3-201ENST00000551552 878 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 VN1R78P-201ENST00000597393 564 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC021749.1-201ENST00000604322 607 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AP005432.2-201ENST00000608162 586 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AP004247.3-201ENST00000608682 624 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AP002782.1-201ENST00000623107 614 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AP002505.2-201ENST00000623585 696 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 AC019226.2-201ENST00000625973 424 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 SCN1A-220ENST00000641603 12506 ntBASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CSNK2A3Q8NEV1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 AC022031.1-201ENST00000585985 2593 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 NACA3P-201ENST00000359690 648 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 U3.2-201ENST00000362981 210 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 RNU6-619P-201ENST00000365146 108 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 AL391361.1-201ENST00000405580 489 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 AL590084.1-201ENST00000407885 387 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 RNU2-65P-201ENST00000410162 185 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 GSTM3P2-201ENST00000412746 530 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 RPL35AP24-201ENST00000413846 330 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 PAICSP7-201ENST00000419829 962 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 RPL34P6-201ENST00000432390 345 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 GTF2IP7-202ENST00000436677 309 ntBASIC4.35□□□□□ -1.71
CSNK2A3Q8NEV1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms