Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MTCO1P45-201ENST00000431457 267 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 HMGB1P18-201ENST00000438801 619 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 RPS3AP46-201ENST00000448352 682 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 AL136097.1-201ENST00000456945 913 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 RNU6-237P-201ENST00000515985 71 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 MIR4769-201ENST00000584126 77 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 AC006386.2-201ENST00000624491 75 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 AC012005.1-201ENST00000624575 75 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 AL137918.1-201ENST00000624542 1922 ntBASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC168Q8NDH2 AC007159.1-201ENST00000566529 4706 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 CCAT2-201ENST00000630920 1752 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 RNU1-44P-201ENST00000384453 163 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 MIR7112-201ENST00000616126 65 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AP001642.1-201ENST00000624727 2117 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 RNU1-33P-201ENST00000364249 162 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AL035423.1-201ENST00000420331 213 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AL160175.1-201ENST00000428124 247 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AL671855.1-201ENST00000446875 1203 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AC020893.1-201ENST00000502452 580 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 RFPL4AP5-201ENST00000514977 504 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 AC244258.1-201ENST00000637553 1071 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 MTCO1P46-201ENST00000451639 1491 ntBASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CCDC168Q8NDH2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 TRIM60P17-201ENST00000415181 719 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 MTND2P15-201ENST00000418575 892 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 NPM1P18-201ENST00000434232 732 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 RNA5SP179-201ENST00000517284 121 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AL137843.1-201ENST00000605078 385 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 MIR8057-201ENST00000620957 69 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AC073530.2-201ENST00000623987 261 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AL031121.1-201ENST00000406553 254 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 FCF1P7-201ENST00000451185 558 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AC007458.1-201ENST00000542812 373 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AC068790.5-201ENST00000602741 355 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AC005344.1-201ENST00000613391 459 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 LINC00561-201ENST00000565815 2738 ntBASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC168Q8NDH2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 SOD2P1-201ENST00000396543 562 ntBASIC3.31□□□□□ -1.88
CCDC168Q8NDH2 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms