Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A3Q8N4M1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 NACA3P-201ENST00000359690 648 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RNA5SP191-201ENST00000362585 102 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RNU6-353P-201ENST00000364266 108 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC068538.1-201ENST00000376856 336 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RNU6-517P-201ENST00000384362 110 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC007068.1-201ENST00000396690 844 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RPS27AP6-201ENST00000427962 448 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC124944.2-201ENST00000429866 1242 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL161722.2-201ENST00000434731 981 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RPL7P11-201ENST00000437586 658 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL031667.1-201ENST00000440222 725 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC073465.2-201ENST00000440938 498 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RPL36AP15-201ENST00000444514 266 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL109741.2-201ENST00000455561 343 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RNU7-140P-201ENST00000459546 60 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 CCDC75P1-201ENST00000469247 791 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC010424.1-201ENST00000506336 297 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC010460.1-201ENST00000507087 466 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 IGBP1P5-201ENST00000507524 1000 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 MRPS33P2-201ENST00000507850 322 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC006427.1-201ENST00000514359 712 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RNU6-720P-201ENST00000516363 108 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC060788.1-201ENST00000521318 469 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 PARP1P2-201ENST00000556806 195 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC010487.1-201ENST00000594408 1172 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 VN1R88P-201ENST00000596787 292 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AL031281.1-201ENST00000604049 488 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 RBM11P1-201ENST00000604951 799 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC015712.7-201ENST00000615211 635 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 FRG1HP-204ENST00000617940 757 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC007494.3-201ENST00000624660 743 ntBASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A3Q8N4M1 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 SNORA70.2-201ENST00000364506 135 ntBASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 DNAJC19P6-201ENST00000401853 280 ntBASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 LINC01347-201ENST00000417964 355 ntBASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A3Q8N4M1 AC069213.2-201ENST00000420238 366 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms