Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR23B-201ENST00000384832 97 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 SNORA71B-202ENST00000439232 272 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AC139783.2-201ENST00000504847 1145 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 BDP1P-201ENST00000582658 1990 ntBASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AC096638.2-201ENST00000434965 711 ntBASIC5.98□□□□□ -1.45
VPS8Q8N3P4 RPL5P30-201ENST00000465511 891 ntBASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AC112230.1-201ENST00000604342 547 ntBASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AC015813.4-201ENST00000610469 179 ntBASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 AL356863.1-201ENST00000623378 1080 ntBASIC5.98□□□□□ -1.45
VPS8Q8N3P4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
VPS8Q8N3P4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 RNU6-316P-201ENST00000391027 107 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 SETP9-201ENST00000423837 832 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 KATNBL1P2-201ENST00000433311 835 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC034236.1-201ENST00000469891 373 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 RNA5SP164-201ENST00000516533 110 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 RNA5SP143-201ENST00000516936 115 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC026403.1-201ENST00000518938 295 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC244505.7-201ENST00000599675 272 ntBASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS8Q8N3P4 AC024560.2-201ENST00000507981 1497 ntBASIC5.96□□□□□ -1.45
VPS8Q8N3P4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VPS8Q8N3P4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 RNU1-85P-201ENST00000364127 164 ntBASIC5.96□□□□□ -1.46
VPS8Q8N3P4 SNORA5A-201ENST00000384111 134 ntBASIC5.96□□□□□ -1.46
VPS8Q8N3P4 AC117434.1-201ENST00000419971 836 ntBASIC5.96□□□□□ -1.46
VPS8Q8N3P4 HMGB3P22-202ENST00000451823 572 ntBASIC5.96□□□□□ -1.46
VPS8Q8N3P4 RPS26P15-201ENST00000488067 348 ntBASIC5.96□□□□□ -1.46
VPS8Q8N3P4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 TRMT10BP1-201ENST00000519377 943 ntBASIC5.96□□□□□ -1.46
VPS8Q8N3P4 AC022695.1-201ENST00000522089 237 ntBASIC5.96□□□□□ -1.46
VPS8Q8N3P4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 AL139395.1-201ENST00000603662 160 ntBASIC5.96□□□□□ -1.46
VPS8Q8N3P4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS8Q8N3P4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 RPL7P60-201ENST00000397636 735 ntBASIC5.95□□□□□ -1.46
VPS8Q8N3P4 SNORA3.3-201ENST00000408712 125 ntBASIC5.95□□□□□ -1.46
VPS8Q8N3P4 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.95□□□□□ -1.46
VPS8Q8N3P4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 MRPS35P3-201ENST00000603189 709 ntBASIC5.95□□□□□ -1.46
VPS8Q8N3P4 AC244517.3-201ENST00000616254 1235 ntBASIC5.95□□□□□ -1.46
VPS8Q8N3P4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS8Q8N3P4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 RNA5SP104-201ENST00000410989 118 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms