Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC110760.3-201ENST00000598794 467 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AL133507.1-201ENST00000605269 557 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 MIR6768-201ENST00000610734 72 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AL158196.1-201ENST00000616786 434 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC009318.3-201ENST00000616916 503 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC131159.1-201ENST00000621854 213 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC024023.1-201ENST00000624530 922 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 LINC02211-204ENST00000642024 1070 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 AC139713.2-215ENST00000641428 5037 ntBASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP4Q8N3C7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 THAP12P4-201ENST00000528321 2266 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 RNU4-31P-201ENST00000384211 141 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 SNORD116-1-201ENST00000384335 95 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 RPS27AP11-201ENST00000402798 447 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AL356131.1-201ENST00000405826 414 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AP000534.2-201ENST00000412729 568 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AF186996.5-201ENST00000418098 904 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 MORF4L1P6-201ENST00000418771 268 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 MFSD13B-201ENST00000420133 1290 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 EXTL2P1-201ENST00000446218 416 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AL133217.1-201ENST00000450980 425 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC005008.1-201ENST00000456151 612 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 RN7SL517P-201ENST00000462240 305 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC021205.1-201ENST00000468797 348 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 RPL23AP44-201ENST00000482216 473 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC118282.2-201ENST00000508739 374 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC087373.1-201ENST00000524920 491 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC090695.1-201ENST00000561269 1222 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC007225.2-201ENST00000562529 256 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 CYP2C60P-201ENST00000566088 139 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AL451086.1-201ENST00000605596 223 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 FRG1HP-204ENST00000617940 757 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AP000676.3-201ENST00000623299 569 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 OR1S1-201ENST00000624470 978 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 LINC01808-202ENST00000641680 1116 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 AC092435.4-201ENST00000623012 4159 ntBASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP4Q8N3C7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CLIP4Q8N3C7 MTND4P26-201ENST00000415971 1359 ntBASIC4.53□□□□□ -1.69
CLIP4Q8N3C7 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.53□□□□□ -1.69
CLIP4Q8N3C7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP4Q8N3C7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP4Q8N3C7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
CLIP4Q8N3C7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
CLIP4Q8N3C7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.52□□□□□ -1.69
CLIP4Q8N3C7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP4Q8N3C7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP4Q8N3C7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms