Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RNU6-1293P-201ENST00000384077 107 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RNU6-831P-201ENST00000384548 107 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AL096800.1-201ENST00000405326 893 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RN7SKP117-201ENST00000410175 264 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.615-201ENST00000410769 117 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 SNX18P13-201ENST00000412442 529 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 BEND7P1-201ENST00000422058 457 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AKR1B10P1-201ENST00000425765 942 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 SNX18P14-201ENST00000429308 574 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AL731892.1-201ENST00000437364 1192 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AL451074.4-201ENST00000447545 470 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 CBX5P1-201ENST00000468470 561 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RPL23AP64-201ENST00000469465 435 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RPL23AP11-201ENST00000475260 469 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RPL5P22-201ENST00000480199 884 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC063943.2-201ENST00000495697 534 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 FTH1P8-201ENST00000498161 514 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC087257.2-201ENST00000538759 928 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 ELOCP31-201ENST00000540463 467 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC024614.1-201ENST00000577546 307 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 SNRPGP17-201ENST00000603780 214 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC004852.1-201ENST00000605206 154 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC122710.3-201ENST00000606566 541 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC006335.3-201ENST00000613408 292 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 MIR6883-201ENST00000614952 78 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 BX005040.2-201ENST00000620504 370 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 RNU6-156P-201ENST00000621869 107 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AL159972.1-201ENST00000625150 448 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AC006116.1-201ENST00000587908 2171 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 SAGE4P-201ENST00000442271 3381 ntBASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
DEPDC4Q8N2C3 CAP1P2-201ENST00000417455 1409 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC009779.8-201ENST00000641684 4384 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 MTCO1P9-201ENST00000505577 1534 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC027088.4-201ENST00000611559 1947 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 OR1S2-201ENST00000302592 978 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 RNU6-1017P-201ENST00000363613 106 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.216-201ENST00000364205 93 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.579-201ENST00000390939 94 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 SSXP10-201ENST00000402595 565 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC069218.2-201ENST00000411665 344 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AL161742.1-201ENST00000418154 584 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 OR4K11P-201ENST00000431829 904 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms