Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VRK3Q8IV63 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
VRK3Q8IV63 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VRK3Q8IV63 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VRK3Q8IV63 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VRK3Q8IV63 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VRK3Q8IV63 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC016716.1-201ENST00000265882 708 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC005294.1-201ENST00000355509 281 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 U3.3-201ENST00000362986 216 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VRK3Q8IV63 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VRK3Q8IV63 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 Y_RNA.390-201ENST00000383932 102 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 RNU6-761P-201ENST00000384148 107 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AL035419.1-201ENST00000397037 564 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 MIR548F1-201ENST00000408667 84 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 SLC35E1P1-201ENST00000419313 864 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 OR5AW1P-201ENST00000426334 1006 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 CNOT7P1-201ENST00000429006 852 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 MED14P1-201ENST00000430517 648 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 ATP5F1P1-201ENST00000433775 569 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC098614.3-201ENST00000438957 440 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 TRIM60P18-201ENST00000441518 828 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 WASF1P1-201ENST00000447560 1131 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 KATNBL1P6-201ENST00000453433 915 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 OR2AO1P-201ENST00000476497 403 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 RPS21P4-201ENST00000487122 248 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 FCF1P3-201ENST00000496394 590 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 WBP1LP4-201ENST00000505043 344 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 RPS4XP20-201ENST00000505751 772 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 PRDX4P1-201ENST00000507189 574 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC109471.1-201ENST00000511631 612 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC008837.2-201ENST00000513076 418 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 OR11J2P-201ENST00000555298 907 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 MIR5708-201ENST00000579723 85 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 MIR1269B-201ENST00000580405 75 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC068790.7-201ENST00000602347 528 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC091805.2-201ENST00000603848 235 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC009597.2-201ENST00000604659 592 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AP001330.5-201ENST00000607176 411 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AL607023.1-201ENST00000620045 248 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC022509.4-201ENST00000621404 572 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VRK3Q8IV63 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.14□□□□□ -1.59
VRK3Q8IV63 AC068870.3-201ENST00000625077 2536 ntBASIC5.14□□□□□ -1.59
VRK3Q8IV63 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 RNA5SP27-201ENST00000363839 119 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 RNA5SP90-201ENST00000364801 99 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 RNU1-43P-201ENST00000365052 165 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 RPS27AP11-201ENST00000402798 447 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 MIR1286-201ENST00000408112 78 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 OR6K4P-201ENST00000423179 955 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms