Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPL23AP57-201ENST00000332361 466 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 MTND2P15-201ENST00000418575 892 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC022695.1-201ENST00000522089 237 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 NELL2-211ENST00000548826 559 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC125494.3-201ENST00000602759 455 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 SNORD66.1-201ENST00000391230 76 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC087650.1-201ENST00000431445 468 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 CCRL1P1-201ENST00000449542 1053 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC012158.1-204ENST00000483430 465 ntBASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSMD3Q7Z407 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 DDX18P6-201ENST00000450119 1997 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AL359643.1-201ENST00000404109 423 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC005326.1-201ENST00000429197 123 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 OR52Y1P-201ENST00000452418 828 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC004924.1-201ENST00000480160 781 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 RNA5SP249-201ENST00000516127 99 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 RERGL-202ENST00000536890 367 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC090286.3-201ENST00000573133 187 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC244258.1-201ENST00000637553 1071 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AJ239321.1-201ENST00000424255 564 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 FTX-210ENST00000603037 8347 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC112198.2-201ENST00000426589 6996 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 LINC01355-201ENST00000566551 5444 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 RNA5SP175-201ENST00000364275 119 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC108751.2-201ENST00000469993 231 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 RNU7-143P-201ENST00000516781 65 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC025627.2-201ENST00000576220 160 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AC133552.5-201ENST00000604266 540 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AL117339.4-201ENST00000608335 7063 ntBASIC2.67□□□□□ -1.98
CSMD3Q7Z407 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSMD3Q7Z407 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD3Q7Z407 EEF1A1P42-201ENST00000613436 1331 ntBASIC2.66□□□□□ -1.98
CSMD3Q7Z407 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD3Q7Z407 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD3Q7Z407 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC2.66□□□□□ -1.98
CSMD3Q7Z407 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD3Q7Z407 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CSMD3Q7Z407 HMGB1P37-201ENST00000439613 609 ntBASIC2.66□□□□□ -1.98
CSMD3Q7Z407 FABP3P2-201ENST00000453169 399 ntBASIC2.66□□□□□ -1.98
CSMD3Q7Z407 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC2.66□□□□□ -1.98
CSMD3Q7Z407 OR8I1P-201ENST00000529291 931 ntBASIC2.66□□□□□ -1.98
CSMD3Q7Z407 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC2.66□□□□□ -1.98
CSMD3Q7Z407 TUG1_1.1-201ENST00000610654 145 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms