Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC007485.2-201ENST00000623493 1667 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.112-201ENST00000363250 102 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 SNORA38B-201ENST00000363524 131 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 RNA5SP512-201ENST00000364550 120 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.557-201ENST00000384680 107 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 SNORA7A-201ENST00000384765 139 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 U3.23-201ENST00000391132 200 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AL121834.1-202ENST00000404494 277 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AL033519.1-201ENST00000407266 307 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MIR548I3-201ENST00000408378 149 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MIR548I1-201ENST00000408810 149 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC127526.1-201ENST00000417526 366 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC104837.2-201ENST00000427236 424 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC104651.2-201ENST00000447549 528 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AL445991.1-201ENST00000450381 475 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 HMGB3P22-202ENST00000451823 572 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 RPL7P15-201ENST00000461190 712 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 RPL7P22-201ENST00000466005 733 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AP003385.3-201ENST00000472498 287 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 RPL12P31-201ENST00000478433 450 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 APOOP3-201ENST00000536787 586 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AL389895.1-201ENST00000554127 252 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MIR4301-201ENST00000577203 66 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC090312.2-201ENST00000582687 378 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 RPL7AP69-201ENST00000595306 806 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC011891.2-201ENST00000604949 397 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 BX664608.1-201ENST00000610519 487 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC009237.17-201ENST00000618111 748 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC005899.7-201ENST00000618199 588 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AL354702.2-202ENST00000641481 890 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AL359195.2-201ENST00000623657 4412 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AC110716.2-201ENST00000563865 3945 ntBASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 AP003486.1-201ENST00000525716 3994 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AP002833.3-201ENST00000625075 2265 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 MKI67P1-201ENST00000604297 1460 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC090337.1-201ENST00000579651 2074 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RNA5SP308-201ENST00000362532 115 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RNU1-5P-201ENST00000362684 144 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RNU6-379P-201ENST00000363813 104 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms