Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRPF38BQ5VTL8 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 OR13C1P-202ENST00000641378 2919 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 RNA5SP394-201ENST00000364216 119 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-343P-201ENST00000364709 104 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-171P-201ENST00000384354 107 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 FAR2P2-201ENST00000413041 594 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 FAR2P4-202ENST00000425399 584 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC068587.1-201ENST00000483613 781 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 RN7SL466P-201ENST00000497546 295 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 SCARNA24.1-201ENST00000516465 137 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 RNA5SP337-201ENST00000517007 109 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-264P-201ENST00000517134 104 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 HMGB1P42-201ENST00000532126 553 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 POLR3GP2-201ENST00000588366 668 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 7SK.7-201ENST00000603504 247 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC097467.4-201ENST00000605504 141 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 HSPE1P14-201ENST00000605812 302 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-89P-201ENST00000606519 100 ntBASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.25□□□□□ -1.25
PRPF38BQ5VTL8 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AC011155.1-201ENST00000316512 456 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 PPIAP22-201ENST00000358455 498 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 Y_RNA.373-201ENST00000365600 103 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 SNORD116-29-201ENST00000384516 83 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 RNU6-606P-201ENST00000384721 111 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AL590143.1-201ENST00000405071 138 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AC094019.1-201ENST00000434678 472 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AL049734.2-201ENST00000441066 616 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 HSPE1P28-201ENST00000443139 211 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AL356981.1-201ENST00000454879 684 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 VN1R17P-201ENST00000472048 1090 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 COPS8P2-201ENST00000473228 627 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 SIAH1P1-201ENST00000479411 923 ntBASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.24□□□□□ -1.25
PRPF38BQ5VTL8 Y_RNA.720-201ENST00000517166 92 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms