Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC099785.1-201ENST00000605697 437 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 SMG1P4-204ENST00000523028 4131 ntBASIC4.94□□□□□ -1.62
USP41Q3LFD5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP41Q3LFD5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.94□□□□□ -1.62
USP41Q3LFD5 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC017007.4-201ENST00000503353 1352 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 RNA5SP509-201ENST00000364577 119 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 SDHCP2-201ENST00000398565 501 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AP000580.1-201ENST00000404439 358 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 CYCSP10-201ENST00000417973 294 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 TMBIM7P-201ENST00000418074 855 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 E2F6P2-201ENST00000420708 748 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 GAPDHP49-201ENST00000421421 961 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AL356387.2-201ENST00000422272 243 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC234779.1-201ENST00000425910 285 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC093422.3-201ENST00000428506 305 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 MTND2P2-201ENST00000434633 945 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 RPS7P2-201ENST00000435134 607 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC002553.2-201ENST00000453217 340 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 RPL23AP24-201ENST00000458203 385 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 PPIAP21-201ENST00000464473 501 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 GTF2IP9-201ENST00000502460 301 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC098799.3-201ENST00000506095 438 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 OR5AK3P-201ENST00000527486 1297 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 RN7SL339P-201ENST00000580597 296 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC091057.3-201ENST00000602684 733 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC012409.3-201ENST00000611343 981 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC007342.8-201ENST00000623278 678 ntBASIC4.93□□□□□ -1.62
USP41Q3LFD5 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP41Q3LFD5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.93□□□□□ -1.62
USP41Q3LFD5 AC025031.4-201ENST00000621248 3271 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 AC027228.2-201ENST00000567141 2154 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP41Q3LFD5 AC006971.1-201ENST00000407916 4486 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 Z95327.2-201ENST00000414579 1873 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP41Q3LFD5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 DHX9P1-201ENST00000436565 3076 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP41Q3LFD5 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP41Q3LFD5 AL133268.1-201ENST00000405676 1401 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 VDAC2P1-201ENST00000399358 958 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 AC233289.1-201ENST00000403700 508 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 ARL4AP5-201ENST00000404372 599 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 U3.35-201ENST00000408405 208 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 VTA1P1-201ENST00000414044 866 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 LINC01881-201ENST00000416103 412 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 RPL7AP25-201ENST00000423357 805 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 AC115285.1-201ENST00000424879 736 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 AL353093.1-201ENST00000441292 436 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 AC022431.1-201ENST00000450941 438 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 RPS27AP16-201ENST00000492222 470 ntBASIC4.92□□□□□ -1.62
USP41Q3LFD5 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.92□□□□□ -1.62
USP41Q3LFD5 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP41Q3LFD5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms