Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM1Q2M3G4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHROOM1Q2M3G4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 MIR23B-201ENST00000384832 97 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 TRIM60P17-201ENST00000415181 719 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 EIF4A1P1-201ENST00000420241 934 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC073069.1-201ENST00000428657 441 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 PPIAP13-201ENST00000434706 478 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 CACYBPP1-201ENST00000438592 684 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC007537.2-201ENST00000472093 511 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 SNORA67.7-201ENST00000516664 135 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 RNU1-45P-201ENST00000517191 141 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC006064.5-201ENST00000541782 248 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC009268.1-201ENST00000561352 1203 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AGGF1P6-201ENST00000569213 976 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC027455.1-201ENST00000574104 594 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AL353726.1-201ENST00000614041 1000 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC015871.5-202ENST00000623252 701 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AC010608.2-201ENST00000624830 470 ntBASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHROOM1Q2M3G4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AL607077.1-201ENST00000401718 499 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 CYCSP19-201ENST00000411715 316 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 TPT1P2-201ENST00000413105 503 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 RPS27AP15-201ENST00000447672 466 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 RNU6-1218P-201ENST00000458990 108 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 METTL15P1-201ENST00000481421 1045 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 TPT1P3-201ENST00000492841 512 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 NDUFB4P12-201ENST00000513465 390 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AC027176.2-201ENST00000559166 746 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 RNU4-89P-201ENST00000607443 133 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 MIR92B-201ENST00000607575 96 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AC017076.1-201ENST00000607613 578 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AL356863.1-201ENST00000623378 1080 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 CDRT1-208ENST00000630868 794 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 OR51C1P-202ENST00000641159 1444 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 AL356489.2-201ENST00000566968 3528 ntBASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SHROOM1Q2M3G4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AP001002.1-201ENST00000625148 1513 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 OR11H4-201ENST00000315409 1082 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RNU6-1251P-201ENST00000364502 107 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RNA5SP513-201ENST00000364648 118 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RNU1-44P-201ENST00000384453 163 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 MT-TP-201ENST00000387461 68 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms