Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPEP4-201ENST00000437636 602 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH1Q08174 MTCYBP6-201ENST00000441810 138 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC073909.1-201ENST00000447112 999 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 ARPC3P5-201ENST00000448802 534 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC092967.1-201ENST00000449016 481 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 RPS15AP1-201ENST00000457423 391 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC090142.1-201ENST00000465776 462 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC114728.1-201ENST00000488289 483 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 MRPL57P6-201ENST00000506570 309 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH1Q08174 KHDC1P1-201ENST00000511053 508 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC093816.1-201ENST00000515076 913 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH1Q08174 PMS2P3-207ENST00000529061 717 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH1Q08174 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC008055.1-201ENST00000547032 609 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC125612.1-201ENST00000547580 377 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH1Q08174 AL121821.2-201ENST00000556081 394 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC090515.3-201ENST00000560431 315 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
PCDH1Q08174 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC009027.1-201ENST00000604510 479 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH1Q08174 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 AL138960.1-201ENST00000613838 513 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 uc_338.9-201ENST00000617424 182 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC090527.3-201ENST00000619041 548 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC211486.4-201ENST00000621495 113 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC068213.1-201ENST00000625124 226 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH1Q08174 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH1Q08174 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 GUCY1B2-204ENST00000531898 1979 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 CKAP2P1-201ENST00000555477 2049 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH1Q08174 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH1Q08174 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH1Q08174 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PCDH1Q08174 LCN1P2-201ENST00000372030 223 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AC127391.1-201ENST00000411737 98 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AL357752.1-201ENST00000412817 349 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 RPS7P8-201ENST00000418311 581 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH1Q08174 MTND2P23-201ENST00000422990 651 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH1Q08174 AL031663.1-201ENST00000437445 219 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH1Q08174 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH1Q08174 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 RPS27AP3-201ENST00000453803 454 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH1Q08174 RN7SL393P-201ENST00000463588 296 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AC083798.1-201ENST00000472671 131 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AC093278.1-201ENST00000494700 600 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH1Q08174 PHBP17-201ENST00000528576 541 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH1Q08174 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDH1Q08174 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PCDH1Q08174 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH1Q08174 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDH1Q08174 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDH1Q08174 AC034105.3-201ENST00000565294 442 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH1Q08174 AC217777.1-201ENST00000570034 1471 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 MIR3157-201ENST00000578688 85 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH1Q08174 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH1Q08174 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH1Q08174 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH1Q08174 AL365204.3-201ENST00000612448 685 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 AL133173.2-201ENST00000614270 90 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH1Q08174 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH1Q08174 MIR6503-201ENST00000622884 86 ntBASIC6.12□□□□□ -1.43
PCDH1Q08174 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PCDH1Q08174 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDH1Q08174 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH1Q08174 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms