Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.56□□□□□ -1.68
LTBQ06643 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBQ06643 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.56□□□□□ -1.68
LTBQ06643 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBQ06643 RPL12P18-201ENST00000437175 325 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 TXNP5-201ENST00000441043 315 ntBASIC4.56□□□□□ -1.68
LTBQ06643 ARL4AP3-201ENST00000441452 574 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC118469.1-201ENST00000442943 488 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 MRPL35P4-201ENST00000453682 566 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 AC091180.1-201ENST00000462104 372 ntBASIC4.56□□□□□ -1.68
LTBQ06643 RPL5P13-201ENST00000462840 709 ntBASIC4.56□□□□□ -1.68
LTBQ06643 RPS23P7-201ENST00000466210 444 ntBASIC4.56□□□□□ -1.68
LTBQ06643 RN7SL591P-201ENST00000496150 292 ntBASIC4.56□□□□□ -1.68
LTBQ06643 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBQ06643 AC004980.4-201ENST00000513375 203 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC138938.1-201ENST00000515431 782 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBQ06643 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBQ06643 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LTBQ06643 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 MTND4LP24-201ENST00000572277 291 ntBASIC4.56□□□□□ -1.68
LTBQ06643 SNORD39.2-201ENST00000579995 76 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC011487.3-201ENST00000593607 453 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AP002906.1-201ENST00000603405 233 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC104687.2-201ENST00000604442 342 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC009237.15-201ENST00000610252 501 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC099494.2-201ENST00000623371 978 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC091905.4-201ENST00000623432 202 ntBASIC4.56□□□□□ -1.68
LTBQ06643 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 AC011447.7-201ENST00000624228 1590 ntBASIC4.56□□□□□ -1.68
LTBQ06643 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LTBQ06643 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 NXF4-202ENST00000416098 1465 ntBASIC4.56□□□□□ -1.68
LTBQ06643 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
LTBQ06643 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LTBQ06643 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.55□□□□□ -1.68
LTBQ06643 AC017007.4-201ENST00000503353 1352 ntBASIC4.55□□□□□ -1.68
LTBQ06643 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LTBQ06643 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.55□□□□□ -1.68
LTBQ06643 STX3-208ENST00000641815 3236 ntBASIC4.55□□□□□ -1.68
LTBQ06643 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LTBQ06643 RN7SKP149-201ENST00000363008 344 ntBASIC4.55□□□□□ -1.68
LTBQ06643 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.55□□□□□ -1.68
LTBQ06643 RNA5SP87-201ENST00000384155 118 ntBASIC4.55□□□□□ -1.68
LTBQ06643 RNU6-83P-201ENST00000384568 112 ntBASIC4.55□□□□□ -1.68
LTBQ06643 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LTBQ06643 AL078599.1-201ENST00000402075 293 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AL138880.1-201ENST00000405824 642 ntBASIC4.55□□□□□ -1.68
LTBQ06643 SNORA77-201ENST00000408716 125 ntBASIC4.55□□□□□ -1.68
LTBQ06643 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.55□□□□□ -1.68
LTBQ06643 RNU4-74P-201ENST00000411280 161 ntBASIC4.55□□□□□ -1.68
LTBQ06643 MTND4P22-201ENST00000413116 1169 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBQ06643 TRGV6-201ENST00000417928 299 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBQ06643 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.55□□□□□ -1.68
LTBQ06643 C1DP1-201ENST00000426049 402 ntBASIC4.55□□□□□ -1.68
LTBQ06643 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBQ06643 AC068287.1-201ENST00000430283 295 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.55□□□□□ -1.68
LTBQ06643 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBQ06643 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBQ06643 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBQ06643 HSFY3P-201ENST00000444242 1191 ntBASIC4.55□□□□□ -1.68
LTBQ06643 HMGB3P6-201ENST00000444896 598 ntBASIC4.55□□□□□ -1.68
LTBQ06643 MTND2P4-201ENST00000445034 1004 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AC004980.3-201ENST00000447046 365 ntBASIC4.55□□□□□ -1.68
LTBQ06643 BTF3P6-201ENST00000448054 499 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBQ06643 OR51B8P-201ENST00000449892 769 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.55□□□□□ -1.68
LTBQ06643 HMGB1P4-201ENST00000455362 567 ntBASIC4.55□□□□□ -1.68
LTBQ06643 RNA5SP103-201ENST00000459503 118 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LTBQ06643 MTCYBP16-201ENST00000509187 1129 ntBASIC4.55□□□□□ -1.68
LTBQ06643 OR5BM1P-201ENST00000512021 366 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AL117351.2-201ENST00000513571 157 ntBASIC4.55□□□□□ -1.68
LTBQ06643 RNU5A-4P-201ENST00000516588 111 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AC105031.1-201ENST00000518550 476 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AC012339.2-201ENST00000523996 453 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AP000859.1-201ENST00000525536 307 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.55□□□□□ -1.68
LTBQ06643 AP002373.2-201ENST00000541631 1060 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LTBQ06643 AC008015.1-201ENST00000555505 465 ntBASIC4.55□□□□□ -1.68
LTBQ06643 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.55□□□□□ -1.68
LTBQ06643 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms