Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ELOCP34-201ENST00000604436 327 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 AC006338.2-201ENST00000616864 791 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 MIR6758-201ENST00000620653 63 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.71□□□□□ -1.82
H3F3AP84243 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.71□□□□□ -1.82
H3F3AP84243 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
H3F3AP84243 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
H3F3AP84243 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
H3F3AP84243 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.71□□□□□ -1.82
H3F3AP84243 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.71□□□□□ -1.82
H3F3AP84243 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
H3F3AP84243 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
H3F3AP84243 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
H3F3AP84243 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 AL031985.3-201ENST00000565390 2449 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.7□□□□□ -1.82
H3F3AP84243 RNU6-146P-201ENST00000384602 108 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 RNU6-603P-201ENST00000411403 107 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.7□□□□□ -1.82
H3F3AP84243 ELOCP18-201ENST00000434209 337 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.7□□□□□ -1.82
H3F3AP84243 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.7□□□□□ -1.82
H3F3AP84243 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.7□□□□□ -1.82
H3F3AP84243 AC006011.1-201ENST00000442758 349 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 HMGB1P16-201ENST00000447155 540 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.7□□□□□ -1.82
H3F3AP84243 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 AL133477.1-201ENST00000457472 514 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 AC105918.1-201ENST00000474399 838 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 AF213884.1-201ENST00000488102 463 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.7□□□□□ -1.82
H3F3AP84243 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.7□□□□□ -1.82
H3F3AP84243 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.7□□□□□ -1.82
H3F3AP84243 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.7□□□□□ -1.82
H3F3AP84243 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.7□□□□□ -1.82
H3F3AP84243 AC107016.1-201ENST00000550463 337 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 HNRNPCP4-201ENST00000571636 900 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 AC011477.5-201ENST00000586571 259 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.7□□□□□ -1.82
H3F3AP84243 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
H3F3AP84243 GMCL1P2-201ENST00000605230 823 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 ARF4P1-201ENST00000605447 541 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 AC015922.4-201ENST00000612568 690 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 AC116447.1-201ENST00000613153 453 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.7□□□□□ -1.82
H3F3AP84243 MIR492-201ENST00000638676 116 ntBASIC3.7□□□□□ -1.82
H3F3AP84243 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.7□□□□□ -1.82
H3F3AP84243 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
H3F3AP84243 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.7□□□□□ -1.82
H3F3AP84243 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
H3F3AP84243 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.69□□□□□ -1.82
H3F3AP84243 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 AC116667.1-201ENST00000604855 2072 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 RPL32P3-201ENST00000359025 275 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 SNORA37-201ENST00000384504 129 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 ZNF603P-201ENST00000405613 487 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 JKAMPP1-201ENST00000413804 919 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.69□□□□□ -1.82
H3F3AP84243 AL590806.1-201ENST00000415818 853 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.69□□□□□ -1.82
H3F3AP84243 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.69□□□□□ -1.82
H3F3AP84243 RPSAP41-201ENST00000439695 860 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 OR52Y1P-201ENST00000452418 828 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 RPL7P1-201ENST00000468161 747 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 RPL7P9-201ENST00000468715 747 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.69□□□□□ -1.82
H3F3AP84243 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.69□□□□□ -1.82
H3F3AP84243 AC017037.1-201ENST00000508460 471 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.69□□□□□ -1.82
H3F3AP84243 OR7E10P-201ENST00000526420 991 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.69□□□□□ -1.82
H3F3AP84243 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.69□□□□□ -1.82
H3F3AP84243 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H3F3AP84243 AC007599.1-201ENST00000568688 1174 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 AL590392.1-201ENST00000604960 446 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms