Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.85□□□□□ -1.63
CCNA1P78396 MTCYBP19-201ENST00000517463 1124 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.85□□□□□ -1.63
CCNA1P78396 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.85□□□□□ -1.63
CCNA1P78396 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.85□□□□□ -1.63
CCNA1P78396 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 RN7SL703P-201ENST00000578485 302 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.85□□□□□ -1.63
CCNA1P78396 AC010200.2-201ENST00000605098 235 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 AL590410.1-201ENST00000617925 333 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 AC015871.5-202ENST00000623252 701 ntBASIC4.85□□□□□ -1.63
CCNA1P78396 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCNA1P78396 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCNA1P78396 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCNA1P78396 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCNA1P78396 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCNA1P78396 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.85□□□□□ -1.63
CCNA1P78396 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCNA1P78396 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCNA1P78396 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCNA1P78396 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.84□□□□□ -1.63
CCNA1P78396 CASC19-261ENST00000641853 1638 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCNA1P78396 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCNA1P78396 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCNA1P78396 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCNA1P78396 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CCNA1P78396 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCNA1P78396 AC006946.1-201ENST00000429106 328 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 OR6C71P-201ENST00000432580 913 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.84□□□□□ -1.63
CCNA1P78396 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.84□□□□□ -1.63
CCNA1P78396 RNU6-1218P-201ENST00000458990 108 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCNA1P78396 AC108022.1-201ENST00000493466 478 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 AP000926.3-201ENST00000497201 299 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 HPRT1P2-201ENST00000505250 544 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.84□□□□□ -1.63
CCNA1P78396 AC090819.1-201ENST00000523800 1111 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.84□□□□□ -1.63
CCNA1P78396 AC053481.3-201ENST00000577881 843 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 AC090953.1-201ENST00000604305 1092 ntBASIC4.84□□□□□ -1.63
CCNA1P78396 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.84□□□□□ -1.63
CCNA1P78396 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.84□□□□□ -1.63
CCNA1P78396 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.84□□□□□ -1.63
CCNA1P78396 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCNA1P78396 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
CCNA1P78396 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.84□□□□□ -1.64
CCNA1P78396 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCNA1P78396 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.84□□□□□ -1.64
CCNA1P78396 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.83□□□□□ -1.64
CCNA1P78396 AP001273.1-201ENST00000624493 3152 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCNA1P78396 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
CCNA1P78396 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.83□□□□□ -1.64
CCNA1P78396 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCNA1P78396 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCNA1P78396 RNU6-984P-201ENST00000363236 109 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 RNA5SP151-201ENST00000365632 117 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 MIR200C-201ENST00000384980 68 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 MIR1271-201ENST00000408537 86 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNA1P78396 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.83□□□□□ -1.64
CCNA1P78396 EIF4A1P1-201ENST00000420241 934 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 AC115285.1-201ENST00000424879 736 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.83□□□□□ -1.64
CCNA1P78396 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 BUD31P2-201ENST00000449374 300 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 AL162388.1-201ENST00000450912 352 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 RPS29P19-201ENST00000479709 171 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNA1P78396 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNA1P78396 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNA1P78396 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCNA1P78396 AC006064.5-201ENST00000541782 248 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCNA1P78396 AC084757.1-201ENST00000559987 490 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNA1P78396 RPL23AP97-201ENST00000568955 471 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.83□□□□□ -1.64
CCNA1P78396 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNA1P78396 FAM60CP-201ENST00000591086 664 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.83□□□□□ -1.64
CCNA1P78396 PSMA6P4-201ENST00000603247 718 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 AC017076.1-201ENST00000607613 578 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 LINC00901.1-201ENST00000617252 152 ntBASIC4.83□□□□□ -1.64
CCNA1P78396 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCNA1P78396 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms