Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC098583.1-201ENST00000480875 255 ntBASIC5.68□□□□□ -1.5
YBX1P67809 HMGN2P25-201ENST00000486956 268 ntBASIC5.68□□□□□ -1.5
YBX1P67809 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 SCARNA18.1-201ENST00000516330 83 ntBASIC5.68□□□□□ -1.5
YBX1P67809 MIR2117-201ENST00000516780 80 ntBASIC5.68□□□□□ -1.5
YBX1P67809 RNU6-430P-201ENST00000517078 107 ntBASIC5.68□□□□□ -1.5
YBX1P67809 AC060775.1-201ENST00000518241 520 ntBASIC5.68□□□□□ -1.5
YBX1P67809 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.68□□□□□ -1.5
YBX1P67809 AC239860.2-201ENST00000525886 270 ntBASIC5.68□□□□□ -1.5
YBX1P67809 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.68□□□□□ -1.5
YBX1P67809 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.68□□□□□ -1.5
YBX1P67809 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.68□□□□□ -1.5
YBX1P67809 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.68□□□□□ -1.5
YBX1P67809 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.68□□□□□ -1.5
YBX1P67809 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 AC060780.3-201ENST00000589464 80 ntBASIC5.68□□□□□ -1.5
YBX1P67809 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.68□□□□□ -1.5
YBX1P67809 AC008277.2-201ENST00000605196 797 ntBASIC5.68□□□□□ -1.5
YBX1P67809 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.68□□□□□ -1.5
YBX1P67809 AC019193.2-201ENST00000610012 634 ntBASIC5.68□□□□□ -1.5
YBX1P67809 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.68□□□□□ -1.5
YBX1P67809 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.68□□□□□ -1.5
YBX1P67809 AC100871.1-201ENST00000507871 1456 ntBASIC5.68□□□□□ -1.5
YBX1P67809 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 AC027088.4-201ENST00000611559 1947 ntBASIC5.68□□□□□ -1.5
YBX1P67809 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
YBX1P67809 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.67□□□□□ -1.5
YBX1P67809 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
YBX1P67809 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
YBX1P67809 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
YBX1P67809 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.67□□□□□ -1.5
YBX1P67809 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 RNA5SP514-201ENST00000363717 111 ntBASIC5.67□□□□□ -1.5
YBX1P67809 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 RNU6-780P-201ENST00000391030 104 ntBASIC5.67□□□□□ -1.5
YBX1P67809 FAT1P1-201ENST00000406588 507 ntBASIC5.67□□□□□ -1.5
YBX1P67809 RN7SKP29-201ENST00000410957 272 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC109780.2-201ENST00000413467 845 ntBASIC5.67□□□□□ -1.5
YBX1P67809 MRPL53P1-201ENST00000414323 319 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC234781.4-201ENST00000419384 244 ntBASIC5.67□□□□□ -1.5
YBX1P67809 GAPDHP49-201ENST00000421421 961 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.67□□□□□ -1.5
YBX1P67809 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.67□□□□□ -1.5
YBX1P67809 TIMM9P3-201ENST00000428659 274 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.67□□□□□ -1.5
YBX1P67809 PPIAP17-201ENST00000438507 471 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 FRG2FP-204ENST00000453982 852 ntBASIC5.67□□□□□ -1.5
YBX1P67809 BX322784.1-201ENST00000455793 1077 ntBASIC5.67□□□□□ -1.5
YBX1P67809 PFN1P6-201ENST00000476786 399 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC019235.1-201ENST00000503847 207 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC011352.3-201ENST00000505162 593 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC018710.1-201ENST00000506509 158 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC108078.1-201ENST00000508073 725 ntBASIC5.67□□□□□ -1.5
YBX1P67809 IMPA1P1-201ENST00000510718 842 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AF131216.2-201ENST00000512316 564 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.67□□□□□ -1.5
YBX1P67809 Y_RNA.675-201ENST00000516389 149 ntBASIC5.67□□□□□ -1.5
YBX1P67809 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.67□□□□□ -1.5
YBX1P67809 WBP1LP3-201ENST00000523033 208 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.67□□□□□ -1.5
YBX1P67809 OR5M7P-201ENST00000526140 972 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.67□□□□□ -1.5
YBX1P67809 AK6P1-201ENST00000540219 478 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC091078.2-201ENST00000557145 559 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.67□□□□□ -1.5
YBX1P67809 AC051619.2-201ENST00000559063 397 ntBASIC5.67□□□□□ -1.5
YBX1P67809 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
YBX1P67809 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 AC005261.5-201ENST00000596280 355 ntBASIC5.67□□□□□ -1.5
YBX1P67809 BNIP3P8-201ENST00000597863 560 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AL009028.1-201ENST00000604895 802 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AL136131.3-201ENST00000607600 188 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC103710.1-201ENST00000610003 901 ntBASIC5.67□□□□□ -1.5
YBX1P67809 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 AC008250.2-201ENST00000615261 205 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AL445264.1-201ENST00000621719 171 ntBASIC5.67□□□□□ -1.5
YBX1P67809 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
YBX1P67809 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
YBX1P67809 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms