Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLRN1P58418 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.01□□□□□ -1.61
CLRN1P58418 ABCC13-202ENST00000463099 3842 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 AC015689.2-201ENST00000528172 1738 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLRN1P58418 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLRN1P58418 OR52B3P-201ENST00000314715 928 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 SNORA64.1-201ENST00000362600 132 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 RNA5SP30-201ENST00000365552 115 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 HMGN1P20-201ENST00000411849 300 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 LINC00993-201ENST00000420453 540 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 AC138761.5-201ENST00000433967 325 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 AC005229.2-201ENST00000456995 399 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 OR9M1P-201ENST00000459641 921 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 AC011476.1-201ENST00000466725 307 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 MTCYBP17-201ENST00000503579 789 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 AC025674.1-201ENST00000507074 324 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.01□□□□□ -1.61
CLRN1P58418 DUTP7-201ENST00000507982 486 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 VN1R84P-201ENST00000593697 235 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 AC063977.5-201ENST00000601044 974 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 RNU6-88P-201ENST00000606801 100 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 AL451049.1-201ENST00000608672 497 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.01□□□□□ -1.61
CLRN1P58418 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLRN1P58418 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLRN1P58418 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.01□□□□□ -1.61
CLRN1P58418 MTND4P16-201ENST00000466108 1367 ntBASIC5.01□□□□□ -1.61
CLRN1P58418 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CLRN1P58418 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.01□□□□□ -1.61
CLRN1P58418 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CLRN1P58418 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLRN1P58418 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 PROS2P-201ENST00000474651 1951 ntBASIC5□□□□□ -1.61
CLRN1P58418 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 MTCO1P14-201ENST00000441695 1559 ntBASIC5□□□□□ -1.61
CLRN1P58418 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CLRN1P58418 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLRN1P58418 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 RNU6-723P-201ENST00000383973 107 ntBASIC5□□□□□ -1.61
CLRN1P58418 MTCYBP36-201ENST00000404146 440 ntBASIC5□□□□□ -1.61
CLRN1P58418 MTCO3P31-201ENST00000405526 789 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 EIF1P1-201ENST00000421436 341 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC127526.2-201ENST00000426436 775 ntBASIC5□□□□□ -1.61
CLRN1P58418 BMS1P19-201ENST00000433925 393 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC091862.1-201ENST00000438016 1100 ntBASIC5□□□□□ -1.61
CLRN1P58418 AL831737.1-201ENST00000441288 271 ntBASIC5□□□□□ -1.61
CLRN1P58418 AL353572.1-201ENST00000442490 417 ntBASIC5□□□□□ -1.61
CLRN1P58418 HMGN1P2-201ENST00000445197 310 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5□□□□□ -1.61
CLRN1P58418 RPL26P28-201ENST00000451325 435 ntBASIC5□□□□□ -1.61
CLRN1P58418 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 UBA52P3-201ENST00000491303 382 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms