Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 AL031663.1-201ENST00000437445 219 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AL591363.1-201ENST00000450091 483 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN20P56880 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.44□□□□□ -1.7
CLDN20P56880 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN20P56880 PTGES3P5-201ENST00000455109 434 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AC005229.2-201ENST00000456995 399 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN20P56880 AL139824.2-201ENST00000458731 1095 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 RPL7AP28-201ENST00000464513 571 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AL161747.1-201ENST00000480068 358 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AL035404.1-201ENST00000497982 568 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 PRELID3BP5-201ENST00000508612 460 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN20P56880 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN20P56880 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN20P56880 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN20P56880 AC010306.1-201ENST00000523223 1117 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN20P56880 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 TVP23CP2-201ENST00000571473 623 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN20P56880 VN1R84P-201ENST00000593697 235 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 CLIC4P2-201ENST00000601934 717 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 FAM25E-202ENST00000608562 189 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AL049539.1-201ENST00000611964 459 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AL049794.2-201ENST00000616301 365 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 VN1R7P-201ENST00000619242 903 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AC006386.1-201ENST00000619436 415 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AC019206.1-201ENST00000621938 425 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 AP001005.3-201ENST00000622049 129 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 OR1S1-201ENST00000624470 978 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.44□□□□□ -1.7
CLDN20P56880 AC017104.5-201ENST00000637647 639 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.44□□□□□ -1.7
CLDN20P56880 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN20P56880 MFSD8-220ENST00000641243 1422 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.44□□□□□ -1.7
CLDN20P56880 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN20P56880 MAPK10-286ENST00000641208 8747 ntBASIC4.44□□□□□ -1.7
CLDN20P56880 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN20P56880 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN20P56880 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN20P56880 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLDN20P56880 RN7SKP149-201ENST00000363008 344 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 SNORA73.1-201ENST00000363107 205 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 MIR937-201ENST00000401271 86 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AL133270.1-201ENST00000402635 279 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 RNU6-77P-201ENST00000410554 91 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN20P56880 GTF2IP5-201ENST00000414608 731 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 TBCAP2-201ENST00000416175 326 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 QRSL1P2-201ENST00000418582 964 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 RPS3AP37-201ENST00000419176 745 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 C1DP1-201ENST00000426049 402 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC073052.1-201ENST00000440417 714 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 RPS26P30-201ENST00000443431 335 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 AL589880.1-201ENST00000448271 287 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 NPM1P39-201ENST00000449818 867 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 OR52J1P-201ENST00000450596 932 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN20P56880 RPS6P2-201ENST00000454208 705 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC093166.2-201ENST00000455969 1017 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC005008.1-201ENST00000456151 612 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 RPL23AP56-201ENST00000460778 453 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC069528.1-202ENST00000482888 637 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC083982.1-201ENST00000485679 344 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLDN20P56880 AC021146.5-201ENST00000503544 545 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC010627.1-201ENST00000503819 1294 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN20P56880 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 RNA5SP392-201ENST00000516905 112 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 snoZ278.1-201ENST00000517059 112 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.43□□□□□ -1.7
CLDN20P56880 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 MTCO3P15-201ENST00000526563 574 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN20P56880 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN20P56880 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 PCNPP1-201ENST00000552501 511 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 EDDM3DP-201ENST00000554692 434 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC068714.1-201ENST00000559623 800 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms