Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC112206.1-201ENST00000468416 477 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 CCDC75P1-201ENST00000469247 791 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 AC006463.2-201ENST00000473326 348 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC104687.1-201ENST00000485829 412 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC007686.1-201ENST00000488511 463 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC020890.1-201ENST00000491837 504 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 AC111193.1-201ENST00000504097 155 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 AC073358.1-201ENST00000505671 684 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.99□□□□□ -1.61
HDAC4P56524 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.99□□□□□ -1.61
HDAC4P56524 OR5AK3P-201ENST00000527486 1297 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 GSTP1P1-201ENST00000548078 319 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 AC025260.1-201ENST00000548858 430 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 CYB5AP5-201ENST00000549779 389 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.99□□□□□ -1.61
HDAC4P56524 BGLT3-201ENST00000564523 994 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AGGF1P5-201ENST00000567900 919 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 MIR4697-201ENST00000582977 78 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 FAM27B-201ENST00000610601 213 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 DUXAP10-204ENST00000612052 616 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC073569.3-201ENST00000619055 682 ntBASIC4.99□□□□□ -1.61
HDAC4P56524 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.99□□□□□ -1.61
HDAC4P56524 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDAC4P56524 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDAC4P56524 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDAC4P56524 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.99□□□□□ -1.61
HDAC4P56524 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HDAC4P56524 AL445437.1-201ENST00000623157 3087 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 PHKBP1-201ENST00000450951 1951 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.98□□□□□ -1.61
HDAC4P56524 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDAC4P56524 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDAC4P56524 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDAC4P56524 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.98□□□□□ -1.61
HDAC4P56524 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.98□□□□□ -1.61
HDAC4P56524 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.98□□□□□ -1.61
HDAC4P56524 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HDAC4P56524 IGKV7-3-201ENST00000357453 298 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 RN7SKP149-201ENST00000363008 344 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 RNA5SP27-201ENST00000363839 119 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 ATG4AP1-201ENST00000416893 538 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 IPMKP1-201ENST00000425988 855 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDAC4P56524 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 AL031663.1-201ENST00000437445 219 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC004938.1-201ENST00000438468 308 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AL357520.1-201ENST00000441557 453 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 EXOSC3P1-201ENST00000448649 500 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 Z95152.1-201ENST00000453556 656 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC008280.2-201ENST00000455473 307 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC104971.1-201ENST00000495117 578 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 SCARNA22-201ENST00000503991 125 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.98□□□□□ -1.61
HDAC4P56524 OR7E13P-201ENST00000526052 910 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDAC4P56524 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.98□□□□□ -1.61
HDAC4P56524 AC133555.2-201ENST00000550213 292 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 AC018552.3-201ENST00000567416 561 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.98□□□□□ -1.61
HDAC4P56524 MIR4789-201ENST00000577469 82 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.98□□□□□ -1.61
HDAC4P56524 BNIP3P38-201ENST00000601117 544 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AP002906.1-201ENST00000603405 233 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC010200.2-201ENST00000605098 235 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.98□□□□□ -1.61
HDAC4P56524 AC093673.2-201ENST00000609674 331 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 MIR7973-1-201ENST00000614683 76 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC109809.1-201ENST00000619665 545 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AL669942.2-201ENST00000620352 697 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AC015804.1-201ENST00000622935 435 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 AL590396.4-201ENST00000636779 956 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 DHX9P1-201ENST00000436565 3076 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDAC4P56524 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
HDAC4P56524 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.98□□□□□ -1.61
HDAC4P56524 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HDAC4P56524 ZNF849P-201ENST00000594711 1566 ntBASIC4.98□□□□□ -1.61
HDAC4P56524 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
HDAC4P56524 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms