Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 CYCSP12-201ENST00000437729 300 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.85□□□□□ -1.63
NR1H2P55055 AL356981.1-201ENST00000454879 684 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.85□□□□□ -1.63
NR1H2P55055 RPS3AP6-201ENST00000484430 795 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NR1H2P55055 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.85□□□□□ -1.63
NR1H2P55055 MTATP6P22-201ENST00000507369 598 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.85□□□□□ -1.63
NR1H2P55055 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.85□□□□□ -1.63
NR1H2P55055 OR5H4P-201ENST00000510851 923 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 AC021146.3-201ENST00000511911 260 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 RNA5SP135-201ENST00000517019 125 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 AC026407.1-201ENST00000518369 204 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.85□□□□□ -1.63
NR1H2P55055 OR5M2P-201ENST00000529003 936 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 HAUS8P1-201ENST00000549005 542 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.85□□□□□ -1.63
NR1H2P55055 AC116553.2-201ENST00000564203 463 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.85□□□□□ -1.63
NR1H2P55055 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
NR1H2P55055 AC009974.1-201ENST00000608881 455 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 MIR7155-201ENST00000615925 56 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.85□□□□□ -1.63
NR1H2P55055 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.85□□□□□ -1.63
NR1H2P55055 AC136428.4-201ENST00000634254 1155 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 BMS1P21-201ENST00000634565 365 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 CASC19-222ENST00000641321 1173 ntBASIC4.85□□□□□ -1.63
NR1H2P55055 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NR1H2P55055 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
NR1H2P55055 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NR1H2P55055 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.85□□□□□ -1.63
NR1H2P55055 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NR1H2P55055 SCARNA15-201ENST00000607520 4325 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NR1H2P55055 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC016716.1-201ENST00000265882 708 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC005294.1-201ENST00000355509 281 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 RNU1-94P-201ENST00000362627 173 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NR1H2P55055 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NR1H2P55055 RNU1-77P-201ENST00000390868 162 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 FABP12P1-201ENST00000401911 322 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL079342.2-201ENST00000403367 482 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AP000580.1-201ENST00000404439 358 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 Z75741.2-201ENST00000417272 1167 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL139148.1-201ENST00000427122 680 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 NPM1P34-201ENST00000428821 893 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 RPL7L1P9-201ENST00000431298 745 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NR1H2P55055 TMX2P1-201ENST00000436507 708 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.84□□□□□ -1.63
NR1H2P55055 RPL12P3-201ENST00000440080 396 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NR1H2P55055 ARL4AP3-201ENST00000441452 574 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 OR10R1P-201ENST00000441524 1141 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 RPS11P7-201ENST00000442125 465 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 EEF1B2P5-201ENST00000444820 548 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.84□□□□□ -1.63
NR1H2P55055 EIF2S2P2-201ENST00000447161 982 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 NOP56P2-201ENST00000447491 769 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 MRPL42P4-201ENST00000453267 443 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.84□□□□□ -1.63
NR1H2P55055 RN7SL172P-201ENST00000460535 303 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 RN7SL727P-201ENST00000482164 296 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AC113420.1-201ENST00000507903 571 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC109464.1-201ENST00000511091 819 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 RN7SKP265-201ENST00000516448 223 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 NPM1P6-201ENST00000521088 871 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.84□□□□□ -1.63
NR1H2P55055 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.84□□□□□ -1.63
NR1H2P55055 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 AL161713.1-201ENST00000555538 145 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.84□□□□□ -1.63
NR1H2P55055 AP005119.2-201ENST00000579735 1105 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.84□□□□□ -1.63
NR1H2P55055 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.84□□□□□ -1.63
NR1H2P55055 AC008687.2-201ENST00000597865 520 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL390816.3-201ENST00000604527 1066 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL450336.1-201ENST00000605180 586 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AC106052.1-201ENST00000608029 497 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL121612.2-201ENST00000612261 482 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 uc_338.18-201ENST00000615451 175 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AC140725.3-201ENST00000616193 880 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AL035461.2-201ENST00000619201 524 ntBASIC4.84□□□□□ -1.63
NR1H2P55055 AP000843.1-201ENST00000624880 701 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms