Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGCS2P54868 AC097505.1-201ENST00000610199 565 ntBASIC4.71□□□□□ -1.66
HMGCS2P54868 AC090246.1-201ENST00000616499 426 ntBASIC4.71□□□□□ -1.66
HMGCS2P54868 AL645927.2-201ENST00000618350 349 ntBASIC4.71□□□□□ -1.66
HMGCS2P54868 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCS2P54868 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HMGCS2P54868 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCS2P54868 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCS2P54868 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMGCS2P54868 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMGCS2P54868 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGCS2P54868 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGCS2P54868 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC106871.1-201ENST00000568324 3102 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS2P54868 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS2P54868 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS2P54868 OR4A15-201ENST00000314706 1035 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 RNU6-761P-201ENST00000384148 107 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 RNU6-891P-201ENST00000384280 111 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 RN7SKP156-201ENST00000410308 342 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC093578.1-201ENST00000415219 368 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AL157884.3-201ENST00000448273 1184 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGCS2P54868 RPL36AP13-201ENST00000457490 317 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 RPS4XP12-201ENST00000461747 709 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 AC092691.2-201ENST00000461787 803 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 AL591473.1-201ENST00000464297 313 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 RN7SL323P-201ENST00000494712 295 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC138938.1-201ENST00000515431 782 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 RN7SKP46-201ENST00000515942 234 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGCS2P54868 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC093591.2-201ENST00000565254 3843 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGCS2P54868 MIR3944-201ENST00000581277 108 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS2P54868 AC015726.1-201ENST00000602353 681 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGCS2P54868 BX322635.1-201ENST00000605804 496 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 AC069200.1-201ENST00000609511 323 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 AC117490.2-201ENST00000610042 594 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGCS2P54868 AL627171.1-201ENST00000618845 1308 ntBASIC4.7□□□□□ -1.66
HMGCS2P54868 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS2P54868 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS2P54868 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS2P54868 SNORA63.1-201ENST00000362493 131 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 SNORD35B-201ENST00000363660 87 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 Y_RNA.333-201ENST00000365274 102 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 AL607077.1-201ENST00000401718 499 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 CRYBB2P1-203ENST00000415709 538 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 GNG5P5-201ENST00000420444 220 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 CYP4F29P-201ENST00000420685 446 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS2P54868 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS2P54868 RPS27AP18-201ENST00000515536 459 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 AC093853.1-201ENST00000515689 483 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 PAICSP4-201ENST00000517543 1253 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS2P54868 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS2P54868 AC067805.1-201ENST00000559344 470 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AL451044.1-201ENST00000604867 238 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 SNORA51-201ENST00000606420 132 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AC140113.4-201ENST00000622087 222 ntBASIC4.69□□□□□ -1.66
HMGCS2P54868 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS2P54868 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS2P54868 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGCS2P54868 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.69□□□□□ -1.66
HMGCS2P54868 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS2P54868 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
HMGCS2P54868 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS2P54868 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HMGCS2P54868 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS2P54868 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS2P54868 SNORA57.3-201ENST00000411095 141 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 MTCO1P51-201ENST00000427672 1060 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms