Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNA5SP479-201ENST00000364858 117 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 HSPD1P16-201ENST00000402302 394 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 Z86062.1-201ENST00000406773 777 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.06□□□□□ -1.76
EFNA3P52797 AC062016.2-201ENST00000420950 676 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 AL157831.1-201ENST00000426134 473 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.06□□□□□ -1.76
EFNA3P52797 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.06□□□□□ -1.76
EFNA3P52797 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
EFNA3P52797 XKRY2-201ENST00000442362 1093 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 GEMIN8P3-201ENST00000445417 720 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 NUTF2P3-201ENST00000448540 384 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 AC243772.1-201ENST00000451620 410 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.06□□□□□ -1.76
EFNA3P52797 AL161747.1-201ENST00000480068 358 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
EFNA3P52797 AC105137.1-201ENST00000484355 562 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 OR9N1P-202ENST00000494289 481 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.06□□□□□ -1.76
EFNA3P52797 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.06□□□□□ -1.76
EFNA3P52797 NDUFB4P12-201ENST00000513465 390 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 RNA5SP49-201ENST00000516450 115 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 RNA5SP519-201ENST00000516480 119 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 snoU109.6-201ENST00000516831 118 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.06□□□□□ -1.76
EFNA3P52797 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.06□□□□□ -1.76
EFNA3P52797 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
EFNA3P52797 CKS1BP1-201ENST00000555221 240 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
EFNA3P52797 AC090312.1-201ENST00000580637 348 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.06□□□□□ -1.76
EFNA3P52797 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.06□□□□□ -1.76
EFNA3P52797 AC006213.5-201ENST00000619673 288 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
EFNA3P52797 AC008013.2-202ENST00000637965 364 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
EFNA3P52797 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
EFNA3P52797 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.06□□□□□ -1.76
EFNA3P52797 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
EFNA3P52797 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
EFNA3P52797 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.06□□□□□ -1.76
EFNA3P52797 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.06□□□□□ -1.76
EFNA3P52797 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.06□□□□□ -1.76
EFNA3P52797 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EFNA3P52797 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
EFNA3P52797 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNA3P52797 MTND4P26-201ENST00000415971 1359 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EFNA3P52797 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EFNA3P52797 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 AL121657.1-201ENST00000327215 531 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 RN7SKP227-201ENST00000364445 330 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 RNA5SP515-201ENST00000364570 118 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EFNA3P52797 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EFNA3P52797 AL356057.1-202ENST00000402263 756 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EFNA3P52797 RN7SKP235-201ENST00000410662 305 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNA3P52797 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNA3P52797 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNA3P52797 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNA3P52797 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNA3P52797 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNA3P52797 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNA3P52797 RPL7P22-201ENST00000466005 733 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 UQCRHP4-201ENST00000471686 272 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNA3P52797 PGBD4P4-201ENST00000509673 613 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNA3P52797 TCP11X3P-202ENST00000514289 1254 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 RN7SKP21-201ENST00000516503 220 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNA3P52797 AP003730.1-201ENST00000524605 285 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.05□□□□□ -1.76
EFNA3P52797 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.05□□□□□ -1.76
EFNA3P52797 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNA3P52797 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EFNA3P52797 HMGB3P26-201ENST00000560051 582 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNA3P52797 AC027455.1-201ENST00000574104 594 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 RN7SL600P-201ENST00000581811 299 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AL020997.2-201ENST00000602607 184 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AL161729.3-201ENST00000603533 673 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AC010857.1-201ENST00000606398 594 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AC242628.1-201ENST00000606810 391 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AL021997.2-201ENST00000615674 271 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EFNA3P52797 AC119674.1-212ENST00000641155 993 ntBASIC4.05□□□□□ -1.76
EFNA3P52797 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms