Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC018865.2-201ENST00000423631 129 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 UQCRHP1-204ENST00000424609 274 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 MTND5P27-201ENST00000428871 1720 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 AC234771.4-201ENST00000441416 730 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 RPS15AP1-201ENST00000457423 391 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AC091982.1-202ENST00000473923 343 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 PFN1P6-201ENST00000476786 399 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 RN7SL259P-201ENST00000478499 253 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 RPL7P6-201ENST00000480903 738 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AL591122.1-201ENST00000487348 492 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AC011005.3-201ENST00000491624 395 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 RPL37P23-201ENST00000492641 294 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AC026826.1-201ENST00000493002 361 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF144AP50876 AC110794.1-201ENST00000505816 425 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 RNU6-202P-201ENST00000515998 96 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 RNU6-566P-201ENST00000516790 107 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF144AP50876 AC008562.1-201ENST00000521763 330 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AC023442.1-201ENST00000531247 422 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.46□□□□□ -1.38
RNF144AP50876 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 IMMP1LP2-201ENST00000552954 492 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.46□□□□□ -1.38
RNF144AP50876 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF144AP50876 AF038458.1-201ENST00000588406 262 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF144AP50876 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 AL592436.1-201ENST00000605135 558 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 AL513218.1-201ENST00000606527 391 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF144AP50876 AL161420.1-201ENST00000619393 264 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF144AP50876 U2.22-201ENST00000636441 106 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
RNF144AP50876 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RNF144AP50876 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF144AP50876 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF144AP50876 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF144AP50876 KPNA2P2-201ENST00000419546 1489 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 TUBBP10-201ENST00000427668 1301 ntBASIC6.46□□□□□ -1.38
RNF144AP50876 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF144AP50876 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF144AP50876 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF144AP50876 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF144AP50876 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF144AP50876 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF144AP50876 AC005261.2-201ENST00000593427 4258 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF144AP50876 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF144AP50876 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF144AP50876 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF144AP50876 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
RNF144AP50876 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF144AP50876 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF144AP50876 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF144AP50876 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF144AP50876 AC023886.2-201ENST00000321285 411 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 RNU6-984P-201ENST00000363236 109 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 RNU6-317P-201ENST00000384031 107 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 SNORA11D-201ENST00000408548 128 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 SNORA11E-201ENST00000408778 128 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 RN7SKP137-201ENST00000411074 307 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF144AP50876 ARL5AP1-201ENST00000418991 388 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RNF144AP50876 OR4K11P-201ENST00000431829 904 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF144AP50876 PHB2P1-201ENST00000434943 890 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 CR391992.1-201ENST00000438601 394 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF144AP50876 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF144AP50876 AC104634.1-201ENST00000452720 462 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 RNU7-66P-201ENST00000459469 62 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 AC128713.1-201ENST00000471495 306 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF144AP50876 MYL6P4-201ENST00000477911 453 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 AC098583.1-201ENST00000480875 255 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 SNORD27.1-201ENST00000516319 72 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 IGKV2-36-201ENST00000519999 223 ntBASIC6.45□□□□□ -1.38
RNF144AP50876 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF144AP50876 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms